8D5J
The complex of Pre-mRNA-Processing Factor 19 (Prpf19) neoantigen KYLQVASHV Presented by H2-Kd
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | MHC class I heavy chain maturation peptide H-2K(D) | polymer | 276 | 32245.8 | 1 | UniProt (Q6RJ37) Pfam (PF00129) Pfam (PF07654) UniProt (by SIFTS) (P01902) In PDB | Mus musculus (house mouse) | |
| 2 | B | Beta-2-microglobulin | polymer | 100 | 11835.6 | 1 | UniProt (P01887) Pfam (PF07654) In PDB | Mus musculus (house mouse) | |
| 3 | C | Pre-mRNA-processing factor 19 | polymer | 9 | 1046.2 | 1 | UniProt (Q99KP6) In PDB | Mus musculus | Nuclear matrix protein 200,PRP19/PSO4 homolog,RING-type E3 ubiquitin transferase PRP19,Senescence evasion factor |
| 4 | water | water | 18.0 | 123 | Chemie (HOH) |
Sequence modifications
A: 0 - 274 (UniProt: Q6RJ37)
B: 2 - 100 (UniProt: P01887)
C: 1 - 9 (UniProt: Q99KP6)
| PDB | External Database | Details |
|---|---|---|
| Glu 275 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Asp 86 | Ala 105 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Leu 3 | Arg 208 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 45127.6 | |
| All* | Total formula weight | 45127.6 |
