8D4T
Mammalian CIV with GDN bound
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | N | Cytochrome c oxidase subunit 1 | polymer | 513 | 56964.7 | 1 | UniProt (P00396) Pfam (PF00115) In PDB | Bos taurus (cattle) | Cytochrome c oxidase polypeptide I |
| 2 | O | Cytochrome c oxidase subunit 2 | polymer | 227 | 26068.4 | 1 | UniProt (P68530) Pfam (PF02790) Pfam (PF00116) In PDB | Bos taurus (cattle) | Cytochrome c oxidase polypeptide II |
| 3 | P | Cytochrome c oxidase subunit 3 | polymer | 258 | 29587.2 | 1 | UniProt (P00415) Pfam (PF00510) In PDB | Bos taurus (cattle) | Cytochrome c oxidase polypeptide III |
| 4 | Q | Cytochrome c oxidase subunit 4 isoform 1, mitochondrial | polymer | 137 | 16153.5 | 1 | UniProt (P00423) Pfam (PF02936) In PDB | Bos taurus (cattle) | Cytochrome c oxidase polypeptide IV,Cytochrome c oxidase subunit IV isoform 1,COX IV-1 |
| 5 | R | Cytochrome c oxidase subunit 5A, mitochondrial | polymer | 102 | 11717.3 | 1 | UniProt (P00426) Pfam (PF02284) In PDB | Bos taurus (cattle) | Cytochrome c oxidase polypeptide Va |
| 6 | S | Cytochrome c oxidase subunit 5B, mitochondrial | polymer | 91 | 10018.3 | 1 | UniProt (P00428) Pfam (PF01215) In PDB | Bos taurus (cattle) | Cytochrome c oxidase polypeptide VIa,Cytochrome c oxidase polypeptide Vb |
| 7 | T | Cytochrome c oxidase subunit 6A2, mitochondrial | polymer | 72 | 8368.5 | 1 | UniProt (P07471) Pfam (PF02046) In PDB | Bos taurus (cattle) | Cytochrome c oxidase polypeptide VIa-heart,COXVIAH,Cytochrome c oxidase polypeptide VIb |
| 8 | U | Cytochrome c oxidase subunit 6B1 | polymer | 78 | 9282.4 | 1 | UniProt (P00429) Pfam (PF02297) In PDB | Bos taurus (cattle) | Cytochrome c oxidase polypeptide VII,Cytochrome c oxidase subunit AED,Cytochrome c oxidase subunit VIb isoform 1,COX VIb-1 |
| 9 | V | Cytochrome c oxidase subunit 6C | polymer | 70 | 8235.7 | 1 | UniProt (P04038) Pfam (PF02937) In PDB | Bos taurus (cattle) | Cytochrome c oxidase polypeptide VIc,Cytochrome c oxidase subunit STA |
| 10 | W | Cytochrome c oxidase subunit 7A1, mitochondrial | polymer | 55 | 6189.1 | 1 | UniProt (P07470) Pfam (PF02238) In PDB | Bos taurus (cattle) | Cytochrome c oxidase subunit VIIIc,VIIIC,Cytochrome c oxidase subunit VIIa-heart,Cytochrome c oxidase subunit VIIa-H,Cytochrome c oxidase subunit VIIa-muscle,Cytochrome c oxidase subunit VIIa-M |
| 11 | X | Cytochrome c oxidase subunit 7B, mitochondrial | polymer | 47 | 5274.0 | 1 | UniProt (P13183) Pfam (PF05392) In PDB | Bos taurus (cattle) | Cytochrome c oxidase polypeptide VIIb,IHQ |
| 12 | Y | Cytochrome c oxidase subunit 7C, mitochondrial | polymer | 46 | 5362.3 | 1 | UniProt (P00430) Pfam (PF02935) In PDB | Bos taurus (cattle) | Cytochrome c oxidase polypeptide VIIIA,Cytochrome c oxidase polypeptide VIIc |
| 13 | M | Cytochrome c oxidase subunit 8A, mitochondrial | polymer | 43 | 4769.7 | 1 | Pfam (PF02285) UniProt (by SIFTS) (P10176) In PDB | Bos taurus (cattle) | |
| 14 | N, O | COPPER (II) ION | non-polymer | 63.5 | 3 | Chemie (CU) | |||
| 15 | N | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 16 | N | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 17 | N | HEME-A | non-polymer | 852.8 | 2 | Chemie (HEA) | |||
| 18 | N, P | (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE | non-polymer | 749.0 | 2 | Chemie (PGV) | |||
| 19 | P | (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE | non-polymer | 768.1 | 1 | Chemie (PEK) | |||
| 20 | P | (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en | non-polymer | 544.8 | 1 | Chemie (9Z9) | |||
| 21 | S | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 13 |
| Total formula weight | 197991.0 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 4819.9 | |
| All* | Total formula weight | 202810.9 |
