8D2W
Zebrafish MFSD2A isoform B in inward open ligand 2B conformation
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Sodium-dependent lysophosphatidylcholine symporter 1-B | polymer | 508 | 56684.0 | 1 | UniProt (Q6DEJ6) Pfam (PF13347) In PDB | Danio rerio (zebrafish) | NLS1-B,Sodium-dependent LPC symporter 1-B,Major facilitator superfamily domain-containing protein 2A-B |
2 | B | FAB light chain | polymer | 201 | 20674.9 | 1 | Mus musculus | ||
3 | C | FAB heavy chain | polymer | 203 | 20568.0 | 1 | Mus musculus | ||
4 | A | [(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] (9~{Z},12~{Z},15~{Z})-octadeca-9,12,15-trienoate | non-polymer | 518.6 | 1 | Chemie (ZGS) | |||
5 | A, C | DODECYL-BETA-D-MALTOSIDE | non-polymer | 510.6 | 15 | Chemie (LMT) | |||
6 | water | water | 18.0 | 5 | Chemie (HOH) |
Sequence modifications
A: 22 - 509 (UniProt: Q6DEJ6)
PDB | External Database | Details |
---|---|---|
Met 2 | - | initiating methionine |
His 3 | - | expression tag |
His 4 | - | expression tag |
His 5 | - | expression tag |
His 6 | - | expression tag |
His 7 | - | expression tag |
His 8 | - | expression tag |
His 9 | - | expression tag |
His 10 | - | expression tag |
His 11 | - | expression tag |
His 12 | - | expression tag |
Glu 13 | - | expression tag |
Asn 14 | - | expression tag |
Leu 15 | - | expression tag |
Tyr 16 | - | expression tag |
Phe 17 | - | expression tag |
Gln 18 | - | expression tag |
Gly 19 | - | expression tag |
Gly 20 | - | expression tag |
Ser 21 | - | expression tag |
Gln 214 | Asn 214 | engineered mutation |
Gln 225 | Asn 225 | engineered mutation |
Gln 509 | Asn 509 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 97926.9 | |
Non-Polymers* | Number of molecules | 16 |
Total formula weight | 8177.9 | |
All* | Total formula weight | 106104.8 |