8CWK
Fab arm of antibodies 4G1-C2 and 10G4 bound to CoV-2 receptor binding domain (RBD)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (H) | Heavy chain of Fab arm of antibody 10G4 | polymer | 228 | 24475.3 | 1 | Homo sapiens (human) | ||
| 2 | B (L) | Light chain of Fab arm of antibody 10G4 | polymer | 215 | 23591.2 | 1 | Homo sapiens (Human) | ||
| 3 | C (A) | Heavy chain of Fab arm of antibody 4G1-C2 | polymer | 232 | 24809.6 | 1 | Homo sapiens (Human) | ||
| 4 | D (B) | Light chain of Fab arm of antibody 4G1-C2 | polymer | 215 | 23614.2 | 1 | UniProt (Q6GMX0) Pfam (PF07686) Pfam (PF07654) | Homo sapiens (human) | |
| 5 | E (C) | Spike protein S1 | polymer | 204 | 22975.7 | 1 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus 2 | |
| 6 | F, H, I, J, K... (H, L, A, B, C) | GLYCEROL | non-polymer | 92.1 | 6 | Chemie (GOL) | |||
| 7 | G, L (L, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 8 | N, O, P, Q, R (H, L, A, B, C) | water | water | 18.0 | 177 | Chemie (HOH) |
Sequence modifications
B: 1 - 214 (UniProt: Q6GMX0)
C: 333 - 528 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Tyr 28 | Asn 50 | conflict |
| Tyr 30 | Asn 52 | conflict |
| Asp 31 | Asn 53 | conflict |
| Asp 32 | Tyr 54 | conflict |
| Gln 38 | Leu 60 | conflict |
| Lys 45 | Asn 67 | conflict |
| Ser 50 | Ala 72 | conflict |
| Gln 79 | Arg 101 | conflict |
| Glu 81 | Asp 103 | conflict |
| Ala 91 | Ser 113 | conflict |
| Trp 92 | Tyr 114 | conflict |
| Pro 93 | Asn 115 | conflict |
| Tyr 94 | Ile 116 | conflict |
| Gln 100 | Gly 122 | conflict |
| Lys 103 | Asn 125 | conflict |
| Ser 215 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly 529 | - | expression tag |
| Ser 530 | - | expression tag |
| His 531 | - | expression tag |
| His 532 | - | expression tag |
| His 533 | - | expression tag |
| His 534 | - | expression tag |
| His 535 | - | expression tag |
| His 536 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 119465.9 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 995.0 | |
| All* | Total formula weight | 120460.9 |






