8CWK
Fab arm of antibodies 4G1-C2 and 10G4 bound to CoV-2 receptor binding domain (RBD)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | H | Heavy chain of Fab arm of antibody 10G4 | polymer | 228 | 24475.3 | 1 | Homo sapiens (human) | ||
2 | L | Light chain of Fab arm of antibody 10G4 | polymer | 215 | 23591.2 | 1 | Homo sapiens (Human) | ||
3 | A | Heavy chain of Fab arm of antibody 4G1-C2 | polymer | 232 | 24809.6 | 1 | Homo sapiens (Human) | ||
4 | B | Light chain of Fab arm of antibody 4G1-C2 | polymer | 215 | 23614.2 | 1 | UniProt (Q6GMX0) Pfam (PF07686) Pfam (PF07654) In PDB | Homo sapiens (human) | |
5 | C | Spike protein S1 | polymer | 204 | 22975.7 | 1 | UniProt (P0DTC2) Pfam (PF09408) In PDB | Severe acute respiratory syndrome coronavirus 2 | |
6 | H, L, A, B, C | GLYCEROL | non-polymer | 92.1 | 6 | Chemie (GOL) | |||
7 | L, C | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
8 | water | water | 18.0 | 177 | Chemie (HOH) |
Sequence modifications
B: 1 - 214 (UniProt: Q6GMX0)
C: 333 - 528 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
Tyr 28 | Asn 50 | conflict |
Tyr 30 | Asn 52 | conflict |
Asp 31 | Asn 53 | conflict |
Asp 32 | Tyr 54 | conflict |
Gln 38 | Leu 60 | conflict |
Lys 45 | Asn 67 | conflict |
Ser 50 | Ala 72 | conflict |
Gln 79 | Arg 101 | conflict |
Glu 81 | Asp 103 | conflict |
Ala 91 | Ser 113 | conflict |
Trp 92 | Tyr 114 | conflict |
Pro 93 | Asn 115 | conflict |
Tyr 94 | Ile 116 | conflict |
Gln 100 | Gly 122 | conflict |
Lys 103 | Asn 125 | conflict |
Ser 215 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly 529 | - | expression tag |
Ser 530 | - | expression tag |
His 531 | - | expression tag |
His 532 | - | expression tag |
His 533 | - | expression tag |
His 534 | - | expression tag |
His 535 | - | expression tag |
His 536 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 119465.9 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 995.0 | |
All* | Total formula weight | 120460.9 |