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8CWI

Fab arm of antibody 10G4 bound to CoV-2 receptor binding domain (RBD)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Spike protein S1polymer20422975.71UniProt (P0DTC2)
Pfam (PF09408)
Severe acute respiratory syndrome coronavirus 2
2B
(H)
Heavy chain of Fab arm of antibody 10G4polymer22824475.31Homo sapiens (Human)
3C
(L)
Light chain of Fab arm of antibody 10G4polymer21523591.21Homo sapiens (Human)
4D
(B)
alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched1057.01In PDB
GlyTouCan (G82348BZ)
5E
(C)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched570.51In PDB
GlyTouCan (G21290RB)
6F, I
(A, L)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
7G, H, J
(H, L)
CHLORIDE IONnon-polymer35.53Chemie (CL)
8K, L, M
(A, H, L)
waterwater18.0667Chemie (HOH)
Sequence modifications
A: 333 - 528 (UniProt: P0DTC2)
PDBExternal DatabaseDetails
Gly 529-expression tag
Ser 530-expression tag
His 531-expression tag
His 532-expression tag
His 533-expression tag
His 534-expression tag
His 535-expression tag
His 536-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight71042.2
BranchedNumber of molecules2
Total formula weight1627.5
Non-Polymers*Number of molecules5
Total formula weight155.0
All*Total formula weight72824.7
*Water molecules are not included.

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PDB entries from 2024-11-13

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