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8CO6

Subtomogram average of Immature Rotavirus TLP penton

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, COuter capsid protein VP4polymer77686768.03UniProt (A0A1Q2TSK9)
Pfam (PF00426)
Pfam (PF17477)
Pfam (PF17478)
In PDB
Rotavirus A
2D, E, F, G, H...Outer capsid glycoprotein VP7polymer32637230.712UniProt (A0A1Q2TSM6)
Pfam (PF00434)
In PDB
Rotavirus A
3d, e, f, g, h...Intermediate capsid protein VP6polymer39744910.712UniProt (A2T3S6)
Pfam (PF00980)
In PDB
Rotavirus A
4q, rInner capsid protein VP2polymer882102413.02UniProt (A2T3R1)
Pfam (PF05087)
In PDB
Rotavirus A
Sequence modifications
A, B, C: 1 - 776 (UniProt: A0A1Q2TSK9)
PDBExternal DatabaseDetails
Thr 185Arg 185conflict
Met 323Val 323conflict
Ser 737Thr 737conflict
Arg 738Lys 738conflict
q, r: -1 - 880 (UniProt: A2T3R1)
PDBExternal DatabaseDetails
Ala 118Lys 120conflict
Arg 129Lys 131conflict
Lys 131Leu 133conflict
Ile 135Arg 137conflict
Lys 140Arg 142conflict
Arg 142Leu 144conflict
Ile 146Trp 148conflict
Lys 152Arg 154conflict
Thr 175Met 177conflict
Ser 206Ala 208conflict
Ala 222Arg 224conflict
Tyr 250His 252conflict
Val 414Ile 416conflict
Val 432Ile 434conflict
Ile 436Val 438conflict
Val 438Pro 440conflict
Asn 477Tyr 479conflict
Tyr 479Gln 481conflict
Ile 503Val 505conflict
Ala 551Ser 553conflict
Ser 553Asn 555conflict
Val 561Ile 563conflict
Ala 640Ser 642conflict
His 650Gln 652conflict
Val 656Arg 658conflict
Ala 657Val 659conflict
Val 676Ile 678conflict
Leu 686Ala 688conflict
Ala 688Asn 690conflict
Asp 690Glu 692conflict
Thr 741Ser 743conflict
Ser 743Asp 745conflict
Val 766Ile 768conflict
Ile 777Lys 779conflict
Val 818Ile 820conflict
Ile 820Thr 822conflict
Val 831Gln 833conflict
Asn 837Ala 839conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains29
Total formula weight1450826.6
All*Total formula weight1450826.6
*Water molecules are not included.

222415

PDB entries from 2024-07-10

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