8CMG
Human Leukocyte Antigen class II allotype DR1 presenting SARS-CoV-2 nsp14 peptide (orf1ab)6420-6434
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | HLA class II histocompatibility antigen, DR alpha chain | polymer | 183 | 21287.1 | 1 | UniProt (P01903) Pfam (PF00993) Pfam (PF07654) In PDB | Homo sapiens (human) | MHC class II antigen DRA |
| 2 | B | Human leukocyte antigen DR beta chain allotype DR1 (DRB1*0101) | polymer | 194 | 22487.2 | 1 | Pfam (PF00969) Pfam (PF07654) UniProt (by SIFTS) (D7RIG0) In PDB | Homo sapiens | |
| 3 | C | Non-structural protein 7 | polymer | 15 | 1719.0 | 1 | UniProt (P0DTD1) In PDB | Severe acute respiratory syndrome coronavirus 2 | nsp7, SARS-Cov-2 nsp14 epitope (orf1ab)6420-6434 |
| 4 | A, B, C | 1,2-ETHANEDIOL | non-polymer | 62.1 | 16 | Chemie (EDO) | |||
| 5 | A, B | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 6 | water | water | 18.0 | 228 | Chemie (HOH) |
Sequence modifications
A: 1 - 182 (UniProt: P01903)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 45493.3 | |
| Non-Polymers* | Number of molecules | 20 |
| Total formula weight | 1377.3 | |
| All* | Total formula weight | 46870.6 |
