8CMF
Human Leukocyte Antigen class II allotype DR1 presenting SARS-CoV-2 nsp3 epitope (orf1ab)1350-1364
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D | HLA class II histocompatibility antigen, DR alpha chain | polymer | 183 | 21287.1 | 2 | UniProt (P01903) Pfam (PF00993) Pfam (PF07654) In PDB | Homo sapiens (human) | MHC class II antigen DRA |
| 2 | B, E | Human leukocyte antigen DR beta chain allotype DR1 (DRB1*0101) | polymer | 194 | 22487.2 | 2 | Pfam (PF00969) Pfam (PF07654) UniProt (by SIFTS) (D7RIG0) In PDB | Homo sapiens | |
| 3 | C, F | SARS-Cov-2 nsp3 epitope (orf1ab)1350-1364 | polymer | 15 | 1712.0 | 2 | UniProt (P0DTD1) In PDB | Severe acute respiratory syndrome coronavirus 2 | |
| 4 | B, D, E | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 5 | B, E | SUCCINIC ACID | non-polymer | 118.1 | 2 | Chemie (SIN) | |||
| 6 | water | water | 18.0 | 196 | Chemie (HOH) |
Sequence modifications
A, D: 1 - 182 (UniProt: P01903)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 90972.6 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 484.4 | |
| All* | Total formula weight | 91457.0 |
