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8CMC

Human Leukocyte Antigen class II allotype DR1 presenting SARS-CoV-2 Spike peptide S511-530

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AHLA class II histocompatibility antigen, DR alpha chainpolymer18321287.11UniProt (P01903)
Pfam (PF00993)
Pfam (PF07654)
In PDB
Homo sapiens (human)MHC class II antigen DRA
2BHuman leukocyte antigen DR beta chain allotype DR1 (DRB1*0101)polymer19422487.21Pfam (PF00969)
Pfam (PF07654)
UniProt (by SIFTS) (D7RIG0)
In PDB
Homo sapiens
3CSpike protein S2'polymer202099.51UniProt (P0DTC2)
In PDB
Severe acute respiratory syndrome coronavirus 2SARS-Cov-2 Spike epitope S511-530
4A, B1,2-ETHANEDIOLnon-polymer62.115Chemie (EDO)
5ASULFATE IONnon-polymer96.12Chemie (SO4)
6B2-(N-MORPHOLINO)-ETHANESULFONIC ACIDnon-polymer195.21Chemie (MES)
7waterwater18.0287Chemie (HOH)
Sequence modifications
A: 1 - 182 (UniProt: P01903)
PDBExternal DatabaseDetails
Met 0-initiating methionine
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight45873.8
Non-Polymers*Number of molecules18
Total formula weight1318.4
All*Total formula weight47192.2
*Water molecules are not included.

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PDB entries from 2024-07-31

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