8CM7
W-formate dehydrogenase M405A from Desulfovibrio vulgaris
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Formate dehydrogenase, alpha subunit, selenocysteine-containing | polymer | 1013 | 112376.9 | 1 | UniProt (Q72EJ1) Pfam (PF04879) Pfam (PF00384) Pfam (PF01568) | Desulfovibrio vulgaris str. Hildenborough | |
| 2 | B (B) | Formate dehydrogenase, beta subunit, putative | polymer | 215 | 23989.5 | 1 | UniProt (Q72EJ0) Pfam (PF13247) | Desulfovibrio vulgaris str. Hildenborough | |
| 3 | C, D (A) | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE | non-polymer | 740.6 | 2 | Chemie (MGD) | |||
| 4 | E, S, T, U (A, B) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 4 | Chemie (SF4) | |||
| 5 | F (A) | HYDROSULFURIC ACID | non-polymer | 34.1 | 1 | Chemie (H2S) | |||
| 6 | G (A) | TUNGSTEN ION | non-polymer | 183.8 | 1 | Chemie (W) | |||
| 7 | H, K, M (A) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 8 | I, O, V (A, B) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 3 | Chemie (PEG) | |||
| 9 | J, L, N, P (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 10 | Q, R (A) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 11 | W, X (A, B) | water | water | 18.0 | 167 | Chemie (HOH) |
Sequence modifications
A: 1 - 1005 (UniProt: Q72EJ1)
| PDB | External Database | Details |
|---|---|---|
| Ala 405 | Met 405 | engineered mutation |
| Trp 1006 | - | expression tag |
| Ser 1007 | - | expression tag |
| His 1008 | - | expression tag |
| Pro 1009 | - | expression tag |
| Gln 1010 | - | expression tag |
| Phe 1011 | - | expression tag |
| Glu 1012 | - | expression tag |
| Lys 1013 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 136366.4 | |
| Non-Polymers* | Number of molecules | 20 |
| Total formula weight | 4019.4 | |
| All* | Total formula weight | 140385.8 |
