8CM6
W-formate dehydrogenase C872A from Desulfovibrio vulgaris - with Formamide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | Formate dehydrogenase, alpha subunit, selenocysteine-containing | polymer | 1013 | 112405.0 | 2 | UniProt (Q72EJ1) Pfam (PF04879) Pfam (PF00384) Pfam (PF01568) | Desulfovibrio vulgaris str. Hildenborough | |
| 2 | B, D (B, D) | Formate dehydrogenase, beta subunit, putative | polymer | 215 | 23989.5 | 2 | UniProt (Q72EJ0) Pfam (PF13247) | Desulfovibrio vulgaris str. Hildenborough | |
| 3 | E, FA (A, C) | HYDROSULFURIC ACID | non-polymer | 34.1 | 2 | Chemie (H2S) | |||
| 4 | F, GA (A, C) | TUNGSTEN ION | non-polymer | 183.8 | 2 | Chemie (W) | |||
| 5 | G, H, HA, IA (A, C) | 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE | non-polymer | 740.6 | 4 | Chemie (MGD) | |||
| 6 | AA, I, JA, VA, WA... (B, A, C, D) | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 8 | Chemie (SF4) | |||
| 7 | BA, J, YA (B, A, D) | CHLORIDE ION | non-polymer | 35.5 | 3 | Chemie (CL) | |||
| 8 | K, KA, L, M, NA... (A, C) | GLYCEROL | non-polymer | 92.1 | 14 | Chemie (GOL) | |||
| 9 | DA, MA, N, P (B, C, A) | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 4 | Chemie (PG4) | |||
| 10 | LA, T (C, A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 2 | Chemie (PEG) | |||
| 11 | CA, RA, SA, TA, UA... (B, C, A) | FORMAMIDE | non-polymer | 45.0 | 7 | Chemie (ARF) | |||
| 12 | EA, ZA (B, D) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 13 | AB, BB, CB, DB (A, B, C, D) | water | water | 18.0 | 1718 | Chemie (HOH) |
Sequence modifications
A, C: 1 - 1005 (UniProt: Q72EJ1)
| PDB | External Database | Details |
|---|---|---|
| Ala 872 | Cys 872 | engineered mutation |
| Trp 1006 | - | expression tag |
| Ser 1007 | - | expression tag |
| His 1008 | - | expression tag |
| Pro 1009 | - | expression tag |
| Gln 1010 | - | expression tag |
| Phe 1011 | - | expression tag |
| Glu 1012 | - | expression tag |
| Lys 1013 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 272788.9 | |
| Non-Polymers* | Number of molecules | 48 |
| Total formula weight | 9035.4 | |
| All* | Total formula weight | 281824.4 |
