8CII
Delta-RBD complex with BA.2-07 fab, SARS1-34 fab and C1 nanobody
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (E) | Spike protein S2' | polymer | 202 | 22935.7 | 1 | UniProt (P0DTC2) Pfam (PF09408) | Homo sapiens (human) | |
| 2 | B (H) | SARS1-34 fab Heavy Chain | polymer | 227 | 24447.5 | 1 | Homo sapiens | ||
| 3 | C (L) | SARS1-34 fab Light Chain | polymer | 214 | 23334.9 | 1 | Homo sapiens | ||
| 4 | D (A) | BA.2-07 fab Heavy Chain | polymer | 231 | 24335.1 | 1 | Homo sapiens | ||
| 5 | E (B) | BA.2-07 fab Light Chain | polymer | 214 | 23256.8 | 1 | Homo sapiens | ||
| 6 | F (C) | C1 nanobody | polymer | 131 | 14659.1 | 1 | Lama glama | ||
| 7 | G (D) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G32152BH) |
Sequence modifications
E: 327 - 528 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| His 327 | Val 327 | conflict |
| His 328 | Arg 328 | conflict |
| His 329 | Phe 329 | conflict |
| His 330 | Pro 330 | conflict |
| His 331 | Asn 331 | conflict |
| His 332 | Ile 332 | conflict |
| Arg 452 | Leu 452 | conflict |
| Lys 478 | Thr 478 | conflict |
| Lys 527 | Pro 527 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 132969.1 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 732.7 | |
| All* | Total formula weight | 133701.8 |
