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8CDO

PBP AccA-F144YG440Q from A. tumefaciens Bo542 in complex with agrocinopine C-like

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AAgrocinopine utilization periplasmic binding protein AccApolymer49856380.81UniProt (A0A2P0QK24)
Pfam (PF00496)
UniProt (by SIFTS) (A5WYD2)
In PDB
Agrobacterium tumefaciens
2B, Cbeta-D-fructofuranose-(2-1)-alpha-D-glucopyranosebranched342.32In PDB
BIRD (PRD_002547)
BIRD (PRD_002548)
3ATETRAETHYLENE GLYCOLnon-polymer194.21Chemie (PG4)
4ADI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
5A1,2-ETHANEDIOLnon-polymer62.19Chemie (EDO)
6ATRIETHYLENE GLYCOLnon-polymer150.21Chemie (PGE)
7A2-O-phosphono-beta-D-glucopyranosenon-polymer260.11BIRD (PRD_002548)
Chemie (BNX)
8A2-O-phosphono-alpha-D-glucopyranosenon-polymer260.11BIRD (PRD_002547)
Chemie (ALX)
9waterwater18.0616Chemie (HOH)
Sequence modifications
A: 31 - 521 (UniProt: A0A2P0QK24)
PDBExternal DatabaseDetails
Met 30-initiating methionine
Tyr 145Phe 136engineered mutation
Gln 440Gly 431engineered mutation
His 522-expression tag
His 523-expression tag
His 524-expression tag
His 525-expression tag
His 526-expression tag
His 527-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight56380.8
BranchedNumber of molecules2
Total formula weight684.6
Non-Polymers*Number of molecules14
Total formula weight1529.4
All*Total formula weight58594.8
*Water molecules are not included.

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PDB entries from 2024-06-05

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