8C5R
Omicron B.1.1.529 2 RBD up conformation
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Spike glycoprotein | polymer | 1060 | 118193.6 | 3 | UniProt (A0A6M4AIH4) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) UniProt (by SIFTS) (P0DTC2) | Alphacoronavirus |
Sequence modifications
A, B, C: 14 - 1147 (UniProt: A0A6M4AIH4)
| PDB | External Database | Details |
|---|---|---|
| Val 67 | Ala 67 | conflict |
| - | His 69 | deletion |
| - | Val 70 | deletion |
| - | Ser 71 | deletion |
| - | Gly 72 | deletion |
| - | Thr 73 | deletion |
| - | Asn 74 | deletion |
| - | Gly 75 | deletion |
| - | Thr 76 | deletion |
| Ser 69 | Lys 77 | conflict |
| Asp 142 | Gly 142 | conflict |
| Ile 211 | Asn 211 | conflict |
| Val 212 | Leu 212 | conflict |
| Pro 213 | Val 213 | conflict |
| Glu 214 | Arg 214 | conflict |
| - | Tyr 248 | deletion |
| - | Leu 249 | deletion |
| - | Thr 250 | deletion |
| - | Pro 251 | deletion |
| - | Gly 252 | deletion |
| - | Asp 253 | deletion |
| - | Ser 254 | deletion |
| Asp 339 | Gly 339 | conflict |
| Leu 371 | Ser 371 | conflict |
| Pro 373 | Ser 373 | conflict |
| Phe 375 | Ser 375 | conflict |
| Asn 417 | Lys 417 | conflict |
| Lys 439 | Asn 439 | conflict |
| Ser 446 | Gly 446 | conflict |
| Asn 477 | Ser 477 | conflict |
| Lys 478 | Thr 478 | conflict |
| Ala 484 | Glu 484 | conflict |
| Arg 493 | Gln 493 | conflict |
| Ser 496 | Gly 496 | conflict |
| Arg 498 | Gln 498 | conflict |
| Tyr 501 | Asn 501 | conflict |
| His 505 | Tyr 505 | conflict |
| Lys 547 | Thr 547 | conflict |
| - | Pro 621 | deletion |
| - | Val 622 | deletion |
| - | Ala 623 | deletion |
| - | Ile 624 | deletion |
| - | His 625 | deletion |
| - | Ala 626 | deletion |
| - | Asp 627 | deletion |
| - | Gln 628 | deletion |
| - | Leu 629 | deletion |
| - | Thr 630 | deletion |
| - | Pro 631 | deletion |
| - | Thr 632 | deletion |
| - | Trp 633 | deletion |
| - | Arg 634 | deletion |
| - | Val 635 | deletion |
| - | Tyr 636 | deletion |
| - | Ser 637 | deletion |
| - | Thr 638 | deletion |
| - | Gly 639 | deletion |
| - | Ser 640 | deletion |
| Tyr 655 | His 655 | conflict |
| - | Gln 677 | deletion |
| - | Thr 678 | deletion |
| - | Asn 679 | deletion |
| - | Ser 680 | deletion |
| - | Pro 681 | deletion |
| - | Arg 682 | deletion |
| - | Arg 683 | deletion |
| - | Ala 684 | deletion |
| - | Arg 685 | deletion |
| - | Ser 686 | deletion |
| - | Val 687 | deletion |
| - | Ala 688 | deletion |
| Lys 764 | Asn 764 | conflict |
| Tyr 796 | Asp 796 | conflict |
| - | Pro 812 | deletion |
| - | Leu 828 | deletion |
| - | Ala 829 | deletion |
| - | Asp 830 | deletion |
| - | Ala 831 | deletion |
| - | Gly 832 | deletion |
| - | Phe 833 | deletion |
| - | Ile 834 | deletion |
| - | Lys 835 | deletion |
| - | Gln 836 | deletion |
| - | Tyr 837 | deletion |
| - | Gly 838 | deletion |
| - | Asp 839 | deletion |
| - | Cys 840 | deletion |
| - | Leu 841 | deletion |
| - | Gly 842 | deletion |
| - | Asp 843 | deletion |
| - | Ile 844 | deletion |
| - | Ala 845 | deletion |
| - | Ala 846 | deletion |
| - | Arg 847 | deletion |
| - | Asp 848 | deletion |
| - | Leu 849 | deletion |
| - | Ile 850 | deletion |
| - | Cys 851 | deletion |
| - | Ala 852 | deletion |
| - | Gln 853 | deletion |
| Lys 856 | Asn 856 | conflict |
| His 954 | Gln 954 | conflict |
| Lys 969 | Asn 969 | conflict |
| Phe 981 | Leu 981 | conflict |
| Pro 986 | Lys 986 | conflict |
| Pro 987 | Val 987 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 354580.8 | |
| All* | Total formula weight | 354580.8 |
