8C5R
Omicron B.1.1.529 2 RBD up conformation
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | Spike glycoprotein | polymer | 1060 | 118193.6 | 3 | UniProt (A0A6M4AIH4) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) UniProt (by SIFTS) (P0DTC2) In PDB | Alphacoronavirus |
Sequence modifications
A, B, C: 14 - 1147 (UniProt: A0A6M4AIH4)
PDB | External Database | Details |
---|---|---|
Val 67 | Ala 67 | conflict |
- | His 69 | deletion |
- | Val 70 | deletion |
- | Ser 71 | deletion |
- | Gly 72 | deletion |
- | Thr 73 | deletion |
- | Asn 74 | deletion |
- | Gly 75 | deletion |
- | Thr 76 | deletion |
Ser 69 | Lys 77 | conflict |
Asp 142 | Gly 142 | conflict |
Ile 211 | Asn 211 | conflict |
Val 212 | Leu 212 | conflict |
Pro 213 | Val 213 | conflict |
Glu 214 | Arg 214 | conflict |
- | Tyr 248 | deletion |
- | Leu 249 | deletion |
- | Thr 250 | deletion |
- | Pro 251 | deletion |
- | Gly 252 | deletion |
- | Asp 253 | deletion |
- | Ser 254 | deletion |
Asp 339 | Gly 339 | conflict |
Leu 371 | Ser 371 | conflict |
Pro 373 | Ser 373 | conflict |
Phe 375 | Ser 375 | conflict |
Asn 417 | Lys 417 | conflict |
Lys 439 | Asn 439 | conflict |
Ser 446 | Gly 446 | conflict |
Asn 477 | Ser 477 | conflict |
Lys 478 | Thr 478 | conflict |
Ala 484 | Glu 484 | conflict |
Arg 493 | Gln 493 | conflict |
Ser 496 | Gly 496 | conflict |
Arg 498 | Gln 498 | conflict |
Tyr 501 | Asn 501 | conflict |
His 505 | Tyr 505 | conflict |
Lys 547 | Thr 547 | conflict |
- | Pro 621 | deletion |
- | Val 622 | deletion |
- | Ala 623 | deletion |
- | Ile 624 | deletion |
- | His 625 | deletion |
- | Ala 626 | deletion |
- | Asp 627 | deletion |
- | Gln 628 | deletion |
- | Leu 629 | deletion |
- | Thr 630 | deletion |
- | Pro 631 | deletion |
- | Thr 632 | deletion |
- | Trp 633 | deletion |
- | Arg 634 | deletion |
- | Val 635 | deletion |
- | Tyr 636 | deletion |
- | Ser 637 | deletion |
- | Thr 638 | deletion |
- | Gly 639 | deletion |
- | Ser 640 | deletion |
Tyr 655 | His 655 | conflict |
- | Gln 677 | deletion |
- | Thr 678 | deletion |
- | Asn 679 | deletion |
- | Ser 680 | deletion |
- | Pro 681 | deletion |
- | Arg 682 | deletion |
- | Arg 683 | deletion |
- | Ala 684 | deletion |
- | Arg 685 | deletion |
- | Ser 686 | deletion |
- | Val 687 | deletion |
- | Ala 688 | deletion |
Lys 764 | Asn 764 | conflict |
Tyr 796 | Asp 796 | conflict |
- | Pro 812 | deletion |
- | Leu 828 | deletion |
- | Ala 829 | deletion |
- | Asp 830 | deletion |
- | Ala 831 | deletion |
- | Gly 832 | deletion |
- | Phe 833 | deletion |
- | Ile 834 | deletion |
- | Lys 835 | deletion |
- | Gln 836 | deletion |
- | Tyr 837 | deletion |
- | Gly 838 | deletion |
- | Asp 839 | deletion |
- | Cys 840 | deletion |
- | Leu 841 | deletion |
- | Gly 842 | deletion |
- | Asp 843 | deletion |
- | Ile 844 | deletion |
- | Ala 845 | deletion |
- | Ala 846 | deletion |
- | Arg 847 | deletion |
- | Asp 848 | deletion |
- | Leu 849 | deletion |
- | Ile 850 | deletion |
- | Cys 851 | deletion |
- | Ala 852 | deletion |
- | Gln 853 | deletion |
Lys 856 | Asn 856 | conflict |
His 954 | Gln 954 | conflict |
Lys 969 | Asn 969 | conflict |
Phe 981 | Leu 981 | conflict |
Pro 986 | Lys 986 | conflict |
Pro 987 | Val 987 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 354580.8 | |
All* | Total formula weight | 354580.8 |