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8BQG

W-formate dehydrogenase from Desulfovibrio vulgaris - Soaking with Formate 1 min

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Formate dehydrogenase, alpha subunit, selenocysteine-containingpolymer1013112437.01UniProt (Q72EJ1)
Pfam (PF04879)
Pfam (PF00384)
Pfam (PF01568)
Desulfovibrio vulgaris str. Hildenborough
2B
(B)
Formate dehydrogenase, beta subunit, putativepolymer23626481.51UniProt (Q72EJ0)
Pfam (PF13247)
Desulfovibrio vulgaris str. Hildenborough
3C, D
(A)
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDEnon-polymer740.62Chemie (MGD)
4E, N, O, P
(A, B)
IRON/SULFUR CLUSTERnon-polymer351.64Chemie (SF4)
5F
(A)
HYDROSULFURIC ACIDnon-polymer34.11Chemie (H2S)
6G
(A)
TUNGSTEN IONnon-polymer183.81Chemie (W)
7H, I, K
(A)
GLYCEROLnon-polymer92.13Chemie (GOL)
8J
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
9L, Q
(A, B)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
10M
(A)
FORMIC ACIDnon-polymer46.01Chemie (FMT)
11R, S
(A, B)
waterwater18.0148Chemie (HOH)
Sequence modifications
A: 36 - 1005 (UniProt: Q72EJ1)
PDBExternal DatabaseDetails
Met 1-initiating methionine
Thr 2-expression tag
Val 3-expression tag
Thr 4-expression tag
Arg 5-expression tag
Arg 6-expression tag
His 7-expression tag
Phe 8-expression tag
Leu 9-expression tag
Lys 10-expression tag
Leu 11-expression tag
Ser 12-expression tag
Ala 13-expression tag
Gly 14-expression tag
Ala 15-expression tag
Ala 16-expression tag
Val 17-expression tag
Ala 18-expression tag
Gly 19-expression tag
Ala 20-expression tag
Phe 21-expression tag
Thr 22-expression tag
Gly 23-expression tag
Leu 24-expression tag
Gly 25-expression tag
Leu 26-expression tag
Ser 27-expression tag
Leu 28-expression tag
Ala 29-expression tag
Pro 30-expression tag
Thr 31-expression tag
Val 32-expression tag
Ala 33-expression tag
Arg 34-expression tag
Ala 35-expression tag
Trp 1006-expression tag
Ser 1007-expression tag
His 1008-expression tag
Pro 1009-expression tag
Gln 1010-expression tag
Phe 1011-expression tag
Glu 1012-expression tag
Lys 1013-expression tag
B: 2 - 215 (UniProt: Q72EJ0)
PDBExternal DatabaseDetails
Met 1-initiating methionine
Asp 216-expression tag
Leu 217-expression tag
Ala 218-expression tag
Pro 219-expression tag
Ser 220-expression tag
Met 221-expression tag
Met 222-expression tag
Thr 223-expression tag
Arg 224-expression tag
Gln 225-expression tag
Gln 226-expression tag
Leu 227-expression tag
Phe 228-expression tag
Ala 229-expression tag
Arg 230-expression tag
Leu 231-expression tag
Phe 232-expression tag
Arg 233-expression tag
Pro 234-expression tag
Arg 235-expression tag
Ala 236-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight138918.5
Non-Polymers*Number of molecules15
Total formula weight3658.2
All*Total formula weight142576.7
*Water molecules are not included.

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PDB entries from 2024-11-20

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