8BK2
X-ray structure of meningococcal factor H binding protein variant 2 in complex with a specific and bactericidal human monoclonal antibody 1B1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C (A, B, C) | Factor H-binding protein | polymer | 260 | 28217.4 | 3 | UniProt (B9VX96) Pfam (PF20937) Pfam (PF08794) UniProt (by SIFTS) (C6JW56) | Neisseria meningitidis serogroup B | |
2 | D, F, H (H, D, F) | Fab Heavy chain | polymer | 226 | 23871.8 | 3 | Homo sapiens | ||
3 | E, G, I (L, E, G) | Fab light Chains | polymer | 216 | 23513.1 | 3 | Homo sapiens | ||
4 | J, K, P, Q, R... (A, B, D, E, F) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 6 | Chemie (EDO) | |||
5 | L (B) | IMIDAZOLE | non-polymer | 69.1 | 1 | Chemie (IMD) | |||
6 | M (C) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
7 | N (L) | 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL | non-polymer | 326.4 | 1 | Chemie (P33) | |||
8 | O (L) | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 1 | Chemie (MPD) | |||
9 | T (G) | HEXAETHYLENE GLYCOL | non-polymer | 282.3 | 1 | Chemie (P6G) | |||
10 | AA, BA, CA, U, V... (E, F, G, A, B...) | water | water | 18.0 | 213 | Chemie (HOH) |
Sequence modifications
A, B, C: 12 - 258 (UniProt: B9VX96)
PDB | External Database | Details |
---|---|---|
Gly 1 | - | expression tag |
Pro 2 | - | expression tag |
Asp 3 | - | expression tag |
Ser 4 | - | expression tag |
Asp 5 | - | expression tag |
Arg 6 | - | expression tag |
Leu 7 | - | expression tag |
Gln 8 | - | expression tag |
Gln 9 | - | expression tag |
Arg 10 | - | expression tag |
Arg 11 | - | expression tag |
Leu 259 | - | expression tag |
Glu 260 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 9 |
Total formula weight | 226807.0 | |
Non-Polymers* | Number of molecules | 11 |
Total formula weight | 1264.4 | |
All* | Total formula weight | 228071.5 |