8BES
Structure of D188A-fructofuranosidase from Rhodotorula dairenensis in complex with fructose
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Beta-fructofuranosidase | polymer | 675 | 70671.3 | 4 | UniProt (A0A856TAI5) Pfam (PF00251) Pfam (PF08244) | Rhodotorula dairenensis | |
| 2 | E (E) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G81315DD) | |||
| 3 | F, K (F, K) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
| 4 | G, I, J, L (G, I, J, L) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
| 5 | H (H) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 1 | In PDB GlyTouCan (G09724ZC) | |||
| 6 | AA, AB, BA, BB, KA... (B, D, C, A) | alpha-D-mannopyranose | non-polymer | 180.2 | 13 | Chemie (MAN) | |||
| 7 | CA, CB, DA, DB, EA... (B, D, A, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 28 | Chemie (NAG) | |||
| 8 | IA, IB, WA, Y (B, D, C, A) | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 209.2 | 4 | Chemie (BTB) | |||
| 9 | JA, JB, XA, Z (B, D, C, A) | beta-D-fructofuranose | non-polymer | 180.2 | 4 | Chemie (FRU) | |||
| 10 | YA (D) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 11 | KB, LB, MB, NB (A, B, C, D) | water | water | 18.0 | 1972 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 675 (UniProt: A0A856TAI5)
| PDB | External Database | Details |
|---|---|---|
| Ala 188 | Asp 188 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 282685.1 | |
| Branched | Number of molecules | 8 |
| Total formula weight | 4692.3 | |
| Non-Polymers* | Number of molecules | 50 |
| Total formula weight | 10199.6 | |
| All* | Total formula weight | 297577.0 |
