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8BD6

Cas12k-sgRNA-dsDNA-TnsC non-productive complex.

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Cas12kpolymer69879156.81UniProt (A0A8M0FGU0)
UniProt (by SIFTS) (A0A8X6EH11)
Scytonema hofmannii
2B
(B)
sgRNApolymer25682376.51Scytonema hofmannii
3C
(C)
DNA target strandpolymer4914916.61synthetic construct
4D
(D)
DNA non-target strandpolymer4915125.71synthetic construct
5E, F, G, H, I...
(R, S, T, U, V...)
TnsCpolymer27631444.69UniProt (A0A8J0PCL3)
Pfam (PF05621)
Scytonema hofmannii
6N, O
(c, d)
DNApolymer4012303.02synthetic construct
7BA, DA, FA, P, R...
(X, Y, Z, R, S...)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.29Chemie (ATP)
8AA, CA, EA, GA, Q...
(W, X, Y, Z, R...)
MAGNESIUM IONnon-polymer24.39Chemie (MG)
Sequence modifications
A: 2 - 639 (UniProt: A0A8M0FGU0)
PDBExternal DatabaseDetails
Met -58-initiating methionine
Gly -57-expression tag
Ser -56-expression tag
Ser -55-expression tag
His -54-expression tag
His -53-expression tag
His -52-expression tag
His -51-expression tag
His -50-expression tag
His -49-expression tag
Ser -48-expression tag
Gly -47-expression tag
Gly -46-expression tag
Gly -45-expression tag
Ser -44-expression tag
Gly -43-expression tag
Gly -42-expression tag
Ser -41-expression tag
Ala -40-expression tag
Trp -39-expression tag
Ser -38-expression tag
His -37-expression tag
Pro -36-expression tag
Gln -35-expression tag
Phe -34-expression tag
Glu -33-expression tag
Lys -32-expression tag
Gly -31-expression tag
Gly -30-expression tag
Gly -29-expression tag
Ser -28-expression tag
Gly -27-expression tag
Gly -26-expression tag
Gly -25-expression tag
Ser -24-expression tag
Gly -23-expression tag
Gly -22-expression tag
Ser -21-expression tag
Ala -20-expression tag
Trp -19-expression tag
Ser -18-expression tag
His -17-expression tag
Pro -16-expression tag
Gln -15-expression tag
Phe -14-expression tag
Glu -13-expression tag
Lys -12-expression tag
Ser -11-expression tag
Gly -10-expression tag
Gly -9-expression tag
Gly -8-expression tag
Glu -7-expression tag
Asn -6-expression tag
Leu -5-expression tag
Tyr -4-expression tag
Phe -3-expression tag
Gln -2-expression tag
Ser -1-expression tag
Asn 0-expression tag
Ala 1-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains15
Total formula weight499183.3
Non-Polymers*Number of molecules18
Total formula weight4783.4
All*Total formula weight503966.7
*Water molecules are not included.

247536

PDB entries from 2026-01-14

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