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8B3F

Pol II-CSB-CSA-DDB1-ELOF1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ADNA-directed RNA polymerase subunitpolymer1970217450.11UniProt (A0A7M4DUC2)
Pfam (PF04997)
Pfam (PF05001)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
Pfam (PF04992)
Pfam (PF04990)
UniProt (by SIFTS) (A0A8D1DPV6)
In PDB
Sus scrofa domesticus (domestic pig)
2BDNA-directed RNA polymerase subunit betapolymer1167133201.61UniProt (A0A0B8RVL1)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF04566)
Pfam (PF04567)
Pfam (PF00562)
Pfam (PF04560)
UniProt (by SIFTS) (I3LGP4)
In PDB
Sus scrofa domesticus (domestic pig)
3CDNA-directed RNA polymerase II subunit RPB3polymer27531439.11UniProt (A0A481DF93)
Pfam (PF01193)
Pfam (PF01000)
UniProt (by SIFTS) (I3LCH3)
In PDB
Sus scrofa domesticus (domestic pig)
4DRNA polymerase II subunit Dpolymer14216331.31UniProt (A0A287ADR4)
Pfam (PF03874)
UniProt (by SIFTS) (A0A4X1VM56)
In PDB
Sus scrofa domesticus (domestic pig)
5EDNA-directed RNA polymerase II subunit Epolymer21024644.31UniProt (I3LSI7)
Pfam (PF03871)
Pfam (PF01191)
In PDB
Sus scrofa domesticus (domestic pig)RPB5 homolog
6FDNA-directed RNA polymerase II subunit Fpolymer12714477.01UniProt (F1SKN8)
Pfam (PF01192)
UniProt (by SIFTS) (A0A4X1VEK9)
In PDB
Sus scrofa domesticus (domestic pig)DNA-directed RNA polymerases I,II,and III subunit RPABC2,RPB6 homolog
7GDNA-directed RNA polymerase II subunit RPB7polymer17219314.31Pfam (PF03876)
Pfam (PF00575)
UniProt (by SIFTS) (A0A4X1VKG7)
In PDB
Sus scrofa domesticus (domestic pig)
8HDNA-directed RNA polymerases I, II, and III subunit RPABC3polymer15017162.31UniProt (A0A4X1ULF2)
Pfam (PF03870)
UniProt (by SIFTS) (I3LCB2)
In PDB
Sus scrofa domesticus (domestic pig)
9IDNA-directed RNA polymerase II subunit RPB9polymer12514541.21UniProt (P60899)
Pfam (PF02150)
Pfam (PF01096)
In PDB
Sus scrofa domesticus (domestic pig)RNA polymerase II subunit B9,DNA-directed RNA polymerase II subunit I,RNA polymerase II 14.5 kDa subunit,RPB14.5
10JDNA-directed RNA polymerases I, II, and III subunit RPABC5polymer677655.11UniProt (A0A7K6NXI9)
Pfam (PF01194)
UniProt (by SIFTS) (A0A8W4F9W9)
In PDB
Sus scrofa domesticus (domestic pig)
11KRNA_pol_L_2 domain-containing proteinpolymer11713310.31UniProt (A0A4X1UK25)
Pfam (PF13656)
UniProt (by SIFTS) (F1RKE4)
In PDB
Sus scrofa domesticus (domestic pig)
12LRNA polymerase II subunit Kpolymer587018.21UniProt (I3LN51)
Pfam (PF03604)
UniProt (by SIFTS) (A0A4X1TRS6)
In PDB
Sus scrofa domesticus (domestic pig)
13MTranscription elongation factor 1 homologpolymer839475.91UniProt (A0A024R7E8)
Pfam (PF05129)
UniProt (by SIFTS) (A0A8D1B522)
In PDB
Homo sapiens (human)
14NNTSpolymer5216027.31Homo sapiens
15PRNApolymer103264.01Homo sapiens
16TTSpolymer5215824.11Homo sapiens
17aDNA excision repair protein ERCC-8polymer39644107.21UniProt (Q13216)
Pfam (PF00400)
In PDB
Homo sapiens (human)Cockayne syndrome WD repeat protein CSA
18bDNA excision repair protein ERCC-6polymer1496168945.81UniProt (Q03468)
Pfam (PF00176)
Pfam (PF00271)
In PDB
Homo sapiens (human)ATP-dependent helicase ERCC6,Cockayne syndrome protein CSB
19dDNA damage-binding protein 1polymer1140127097.51UniProt (Q16531)
Pfam (PF10433)
Pfam (PF03178)
In PDB
Homo sapiens (human)DDB p127 subunit,DNA damage-binding protein a,DDBa,Damage-specific DNA-binding protein 1,HBV X-associated protein 1,XAP-1,UV-damaged DNA-binding factor,UV-damaged DNA-binding protein 1,UV-DDB 1,XPE-binding factor,XPE-BF,Xeroderma pigmentosum group E-complementing protein,XPCe
20J, L, M, A, B...ZINC IONnon-polymer65.49Chemie (ZN)
21AMAGNESIUM IONnon-polymer24.31Chemie (MG)
Sequence modifications
A: 1 - 1970 (UniProt: A0A7M4DUC2)
PDBExternal DatabaseDetails
-Tyr 1636deletion
-Ser 1637deletion
-Pro 1638deletion
-Thr 1639deletion
-Ser 1640deletion
-Pro 1641deletion
-Ser 1642deletion
-Tyr 1643deletion
-Ser 1644deletion
-Pro 1645deletion
-Thr 1646deletion
-Ser 1647deletion
-Pro 1648deletion
-Ser 1649deletion
b: 1 - 1493 (UniProt: Q03468)
PDBExternal DatabaseDetails
Ser -2-expression tag
Asn -1-expression tag
Ala 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains19
Total formula weight901286.6
Non-Polymers*Number of molecules10
Total formula weight613.0
All*Total formula weight901899.5
*Water molecules are not included.

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PDB entries from 2024-07-24

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