8B2R
Complex of rice blast (Magnaporthe oryzae) effector protein AVR-PikF with a rice (Oryza sativa) RGA5 HMA domain mutant.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Disease resistance protein RGA5 | polymer | 78 | 8409.9 | 1 | UniProt (F7J0N2) In PDB | Oryza sativa (Asian cultivated rice) | Os11gRGA5,SasRGA5 |
2 | B | AVR-Pik protein | polymer | 86 | 9922.3 | 1 | UniProt (C4B8B8) Pfam (PF22383) UniProt (by SIFTS) (A0A219T3Y8) In PDB | Pyricularia oryzae | AVR-Pik protein ( Pikmprotein,Pikp protein ),AvrPi7 protein |
3 | A | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
4 | A, B | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
5 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
6 | water | water | 18.0 | 180 | Chemie (HOH) |
Sequence modifications
A: 997 - 1071 (UniProt: F7J0N2)
B: 31 - 113 (UniProt: C4B8B8)
PDB | External Database | Details |
---|---|---|
Gly 994 | - | expression tag |
Pro 995 | - | expression tag |
Met 996 | - | expression tag |
Asp 1033 | Glu 1033 | variant |
Gln 1039 | Val 1039 | variant |
Gln 1065 | Met 1065 | variant |
Glu 1068 | Leu 1068 | variant |
Lys 1070 | Glu 1070 | variant |
Glu 1071 | Lys 1071 | variant |
PDB | External Database | Details |
---|---|---|
Gly 28 | - | expression tag |
Pro 29 | - | expression tag |
Met 30 | - | expression tag |
Asn 46 | His 46 | variant |
Ala 47 | Pro 47 | variant |
Asp 48 | Gly 48 | variant |
Lys 78 | Met 78 | variant |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 18332.2 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 229.0 | |
All* | Total formula weight | 18561.2 |