Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A1) | 40S ribosomal protein S4 | polymer | 264 | 29971.2 | 1 | UniProt (A0A1S4DQ51) Pfam (PF08071) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121) | Nicotiana tabacum (common tobacco) | |
2 | B (k1) | 40S ribosomal protein S6 | polymer | 249 | 28368.3 | 1 | UniProt (A0A1S3Z3Y7) Pfam (PF01092) | Nicotiana tabacum (common tobacco) | |
3 | C (h1) | 18S rRNA | polymer | 1808 | 583622.2 | 1 | Nicotiana tabacum | ||
4 | D (l1) | 40S ribosomal protein S10-1-like | polymer | 208 | 23121.4 | 1 | UniProt (A0A1S4DHU6) Pfam (PF03501) | Nicotiana tabacum (common tobacco) | |
5 | E (C1) | 40S ribosomal protein S12 | polymer | 144 | 15190.6 | 1 | UniProt (A0A1S4B129) Pfam (PF01248) | Nicotiana tabacum (common tobacco) | |
6 | F (D1) | 40S ribosomal protein S17-like | polymer | 149 | 16643.3 | 1 | UniProt (A0A1S3Z9G2) Pfam (PF00833) | Nicotiana tabacum (common tobacco) | |
7 | G (E1) | 40S ribosomal protein S19-3 | polymer | 143 | 16034.4 | 1 | UniProt (A0A1S3Y949) Pfam (PF01090) | Nicotiana tabacum (common tobacco) | |
8 | H (F1) | 40S ribosomal protein S3a | polymer | 261 | 29782.6 | 1 | UniProt (Q285L8) Pfam (PF01015) | Nicotiana tabacum (common tobacco) | Protein cyc07 |
9 | I (G1) | 40S ribosomal protein S21 | polymer | 83 | 9307.5 | 1 | UniProt (A0A1S4A3T4) Pfam (PF01249) | Nicotiana tabacum (common tobacco) | |
10 | J (H1) | 40S ribosomal protein S24 | polymer | 133 | 15429.3 | 1 | UniProt (A0A1S3ZXI6) Pfam (PF01282) | Nicotiana tabacum (common tobacco) | |
11 | K (I1) | 40S ribosomal protein S25 | polymer | 107 | 11795.9 | 1 | UniProt (A0A076L2E2) Pfam (PF03297) | Nicotiana tabacum (common tobacco) | |
12 | L (J1) | 40S ribosomal protein S26 | polymer | 127 | 14540.1 | 1 | UniProt (A0A1S4CWI7) Pfam (PF01283) | Nicotiana tabacum (common tobacco) | |
13 | M (K1) | 40S ribosomal protein S27 | polymer | 86 | 9613.1 | 1 | UniProt (A0A1S3XJK0) Pfam (PF01667) | Nicotiana tabacum (common tobacco) | |
14 | N (L1) | 40S ribosomal protein S28 | polymer | 65 | 7481.7 | 1 | UniProt (A0A1S4AS05) Pfam (PF01200) | Nicotiana tabacum (common tobacco) | |
15 | O (M1) | 40S ribosomal protein S30 | polymer | 62 | 6953.3 | 1 | UniProt (A0A1S3XGJ0) Pfam (PF04758) | Nicotiana tabacum (common tobacco) | |
16 | P (N1) | ubiquitin-40S ribosomal protein S27a-like | polymer | 156 | 17739.7 | 1 | UniProt (A0A1S4C0C1) Pfam (PF00240) Pfam (PF01599) | Nicotiana tabacum (common tobacco) | |
17 | Q (O1) | 40S ribosomal protein S7 | polymer | 191 | 22121.5 | 1 | UniProt (A0A1S3Z906) Pfam (PF01251) | Nicotiana tabacum (common tobacco) | |
18 | R (P1) | 40S ribosomal protein S8 | polymer | 224 | 25164.0 | 1 | UniProt (A0A1S4CZK3) Pfam (PF01201) | Nicotiana tabacum (common tobacco) | |
19 | S (Q1) | guanine nucleotide-binding protein subunit beta-like protein | polymer | 328 | 36061.8 | 1 | UniProt (A0A1S4ABX7) Pfam (PF00400) | Nicotiana tabacum (common tobacco) | |
20 | T (R1) | 40S ribosomal protein S20-2 | polymer | 122 | 13651.9 | 1 | UniProt (A0A1S3XHL0) Pfam (PF00338) | Nicotiana tabacum (common tobacco) | |
21 | U (S1) | 40S ribosomal protein S14-2 | polymer | 150 | 16375.8 | 1 | UniProt (A0A1S3XAN1) Pfam (PF00411) | Nicotiana tabacum (common tobacco) | |
22 | V (T1) | 40S ribosomal protein S23 | polymer | 142 | 15771.6 | 1 | UniProt (A0A1S4C879) Pfam (PF00164) | Nicotiana tabacum (common tobacco) | |
23 | W (U1) | 40S ribosomal protein S18 | polymer | 152 | 17578.5 | 1 | UniProt (A0A1S3YM01) Pfam (PF00416) | Nicotiana tabacum (common tobacco) | |
24 | X (V1) | 40S ribosomal protein S29 | polymer | 56 | 6455.6 | 1 | UniProt (A0A1S4DPT4) Pfam (PF00253) | Nicotiana tabacum (common tobacco) | |
25 | Y (W1) | 30S ribosomal protein S15, chloroplastic | polymer | 151 | 17099.3 | 1 | UniProt (A0A1S3ZRI7) Pfam (PF08069) Pfam (PF00312) | Nicotiana tabacum (common tobacco) | |
26 | Z (X1) | 40S ribosomal protein S11-like | polymer | 159 | 17724.8 | 1 | UniProt (A0A1S4BW10) Pfam (PF16205) Pfam (PF00366) | Nicotiana tabacum (common tobacco) | |
27 | AA (Y1) | 40S ribosomal protein S15-like | polymer | 152 | 17274.4 | 1 | UniProt (A0A1S4DFI4) Pfam (PF00203) | Nicotiana tabacum (common tobacco) | |
28 | BA (Z1) | 40S ribosomal protein SA | polymer | 336 | 35894.1 | 1 | UniProt (A0A1S3Y4M0) Pfam (PF00318) | Nicotiana tabacum (common tobacco) | |
29 | CA (a1) | 40S ribosomal protein S3-2-like | polymer | 248 | 27758.5 | 1 | UniProt (A0A1S4BXU2) Pfam (PF07650) Pfam (PF00189) | Nicotiana tabacum (common tobacco) | |
30 | DA (b1) | 40S ribosomal protein S9-2-like | polymer | 197 | 23103.8 | 1 | UniProt (A0A1S4B907) Pfam (PF00163) Pfam (PF01479) | Nicotiana tabacum (common tobacco) | |
31 | EA (c1) | 40S ribosomal protein S2-3-like | polymer | 280 | 30652.7 | 1 | UniProt (A0A1S3XAX8) Pfam (PF00333) Pfam (PF03719) | Nicotiana tabacum (common tobacco) | |
32 | FA (d1) | 40S ribosomal protein S5-like | polymer | 210 | 23373.9 | 1 | UniProt (A0A1S4BXT5) Pfam (PF00177) | Nicotiana tabacum (common tobacco) | |
33 | GA (e1) | 40S ribosomal protein S15a-1 | polymer | 130 | 14815.4 | 1 | UniProt (A0A1S4DBQ8) Pfam (PF00410) | Nicotiana tabacum (common tobacco) | 40S ribosomal protein S15a-1 isoform X1 |
34 | HA (f1) | 40S ribosomal protein S16 | polymer | 147 | 16731.7 | 1 | UniProt (A0A1S4AU23) Pfam (PF00380) | Nicotiana tabacum (common tobacco) | |
35 | IA (B1) | mRNA | polymer | 12 | 3629.0 | 1 | Nicotiana tabacum | ||
36 | JA, KA (i2, W2) | tRNA | polymer | 76 | 24571.6 | 2 | GenBank (19120) | Nicotiana tabacum (common tobacco) | |
37 | LA (C3) | 5S rRNA | polymer | 119 | 38328.8 | 1 | GenBank (2276356346) | Nicotiana tabacum (common tobacco) | |
38 | MA (D3) | 60S ribosomal protein L13 | polymer | 206 | 23595.5 | 1 | UniProt (A0A1S4CSN1) Pfam (PF01294) | Nicotiana tabacum (common tobacco) | |
39 | NA (E3) | 60S ribosomal protein L14-1 | polymer | 134 | 15443.4 | 1 | UniProt (A0A1S4A807) Pfam (PF01929) | Nicotiana tabacum (common tobacco) | |
40 | OA (F3) | Ribosomal protein L15 | polymer | 204 | 24228.3 | 1 | UniProt (A0A1S4D5P7) Pfam (PF00827) | Nicotiana tabacum (common tobacco) | |
41 | PA (G3) | 60S ribosomal protein L18-2-like | polymer | 187 | 20905.8 | 1 | UniProt (A0A1S4DF55) Pfam (PF17135) | Nicotiana tabacum (common tobacco) | |
42 | QA (H3) | Ribosomal protein L19 | polymer | 214 | 25055.7 | 1 | UniProt (A0A1S3X0I4) Pfam (PF01280) | Nicotiana tabacum (common tobacco) | |
43 | RA (I3) | 60S ribosomal protein L18a | polymer | 178 | 21513.3 | 1 | UniProt (A0A1S4CP52) Pfam (PF01775) | Nicotiana tabacum (common tobacco) | |
44 | SA (J3) | 60S ribosomal protein L21-1-like | polymer | 164 | 18716.9 | 1 | UniProt (A0A1S3XCW6) Pfam (PF01157) | Nicotiana tabacum (common tobacco) | |
45 | TA (K3) | 60S ribosomal protein L22-2-like | polymer | 127 | 14277.4 | 1 | UniProt (A0A1S4BSU3) Pfam (PF01776) | Nicotiana tabacum (common tobacco) | |
46 | UA (L3) | 60S ribosomal protein L24-like | polymer | 164 | 18606.0 | 1 | UniProt (A0A1S4BHF2) Pfam (PF01246) | Nicotiana tabacum (common tobacco) | |
47 | VA (M3) | eL27 (60S ribosomal protein L27) | polymer | 135 | 15722.7 | 1 | UniProt (A0A1S4AEL0) Pfam (PF00467) Pfam (PF01777) | Nicotiana tabacum (common tobacco) | |
48 | WA (N3) | eL28 (60S ribosomal protein L28) | polymer | 143 | 15954.6 | 1 | UniProt (A0A1S4D1U6) Pfam (PF01778) | Nicotiana tabacum (common tobacco) | |
49 | XA (O3) | 60S ribosomal protein L29 | polymer | 61 | 7132.0 | 1 | UniProt (A0A1S3YR12) Pfam (PF01779) | Nicotiana tabacum (common tobacco) | |
50 | YA (P3) | 60S ribosomal protein L30-like | polymer | 113 | 12420.5 | 1 | UniProt (A0A1S3WZ09) Pfam (PF01248) | Nicotiana tabacum (common tobacco) | |
51 | ZA (Q3) | eL31 (60S ribosomal protein L31) | polymer | 120 | 13894.2 | 1 | UniProt (A0A1S3Y3V5) Pfam (PF01198) | Nicotiana tabacum (common tobacco) | |
52 | AB (R3) | 60S ribosomal protein L32-1 | polymer | 133 | 15665.5 | 1 | UniProt (A0A1S3Z2X4) Pfam (PF01655) | Nicotiana tabacum (common tobacco) | |
53 | BB (S3) | eL33 (60S ribosomal protein L35a) | polymer | 112 | 12959.2 | 1 | UniProt (A0A1S3XU79) Pfam (PF01247) | Nicotiana tabacum (common tobacco) | |
54 | CB (T3) | 60S ribosomal protein L34 | polymer | 120 | 13788.4 | 1 | UniProt (P41098) Pfam (PF01199) | Nicotiana tabacum (common tobacco) | |
55 | DB (U3) | eL36 (60S ribosomal protein L36) | polymer | 110 | 12361.8 | 1 | UniProt (A0A1S4D2I2) Pfam (PF01158) | Nicotiana tabacum (common tobacco) | |
56 | EB (V3) | Ribosomal protein L37 | polymer | 95 | 10879.8 | 1 | UniProt (A0A1S4DN51) Pfam (PF01907) | Nicotiana tabacum (common tobacco) | |
57 | FB (W3) | 60S ribosomal protein L38 | polymer | 69 | 8101.7 | 1 | UniProt (A0A1S4C4G8) Pfam (PF01781) | Nicotiana tabacum (common tobacco) | |
58 | GB (X3) | 60S ribosomal protein L39-3 | polymer | 51 | 6503.8 | 1 | UniProt (A0A1S3YR32) Pfam (PF00832) | Nicotiana tabacum (common tobacco) | |
59 | HB (Y3) | ubiquitin-60S ribosomal protein L40 | polymer | 128 | 14717.4 | 1 | UniProt (A0A1S3X011) Pfam (PF00240) Pfam (PF01020) | Nicotiana tabacum (common tobacco) | |
60 | IB (p3) | 60S ribosomal protein L41 | polymer | 25 | 3445.4 | 1 | UniProt (P62121) Pfam (PF05162) | Nicotiana tabacum (common tobacco) | |
61 | JB (Z3) | 60S ribosomal protein L44 | polymer | 105 | 12037.3 | 1 | UniProt (A0A1S4AVP7) Pfam (PF00935) | Nicotiana tabacum (common tobacco) | |
62 | KB (a3) | 60S ribosomal protein L37a | polymer | 92 | 10280.1 | 1 | UniProt (A0A1S3X5Y9) Pfam (PF01780) | Nicotiana tabacum (common tobacco) | |
63 | LB (b3) | eL6 (60S ribosomal protein L6) | polymer | 230 | 25536.4 | 1 | UniProt (A0A1S4B0G2) Pfam (PF03868) Pfam (PF01159) | Nicotiana tabacum (common tobacco) | |
64 | MB (c3) | 60S ribosomal protein L7a | polymer | 258 | 29432.2 | 1 | UniProt (A0A1S4D668) Pfam (PF01248) | Nicotiana tabacum (common tobacco) | |
65 | NB (d3) | uL13 (60S ribosomal protein L13a) | polymer | 206 | 23525.2 | 1 | UniProt (A0A1S4DN49) Pfam (PF00572) | Nicotiana tabacum (common tobacco) | |
66 | OB (e3) | 60S ribosomal protein L23 | polymer | 140 | 15040.9 | 1 | UniProt (A0A1S3XSQ1) Pfam (PF00238) | Nicotiana tabacum (common tobacco) | |
67 | PB (f3) | uL15 (60S ribosomal protein L27a) | polymer | 148 | 16578.4 | 1 | UniProt (A0A1S4BFD5) Pfam (PF00828) | Nicotiana tabacum (common tobacco) | |
68 | QB (g3) | uL16 (60S ribosomal protein L10) | polymer | 221 | 25012.4 | 1 | UniProt (A0A1S3Z2D7) Pfam (PF00252) | Nicotiana tabacum (common tobacco) | |
69 | RB (h3) | 60S ribosomal protein L5-like | polymer | 301 | 34627.3 | 1 | UniProt (A0A1S3XE16) Pfam (PF17144) Pfam (PF14204) | Nicotiana tabacum (common tobacco) | |
70 | SB (j3) | 50S ribosomal protein L22, chloroplastic | polymer | 175 | 20136.2 | 1 | UniProt (A0A1S4CCH0) Pfam (PF00237) | Nicotiana tabacum (common tobacco) | |
71 | TB (k3) | 60S ribosomal protein L23a | polymer | 154 | 17321.5 | 1 | UniProt (Q07761) Pfam (PF03939) Pfam (PF00276) | Nicotiana tabacum (common tobacco) | L25 |
72 | UB (m3) | uL24 (60S ribosomal protein L26) | polymer | 146 | 16748.5 | 1 | UniProt (A0A1S4DPM5) Pfam (PF16906) Pfam (PF00467) | Nicotiana tabacum (common tobacco) | |
73 | VB (n3) | 60S ribosomal protein L35-like | polymer | 123 | 14352.5 | 1 | UniProt (A0A1S3WY31) Pfam (PF00831) | Nicotiana tabacum (common tobacco) | |
74 | WB (o3) | uL2 (60S ribosomal protein L8) | polymer | 260 | 28220.7 | 1 | UniProt (A0A1S3XXQ5) Pfam (PF00181) Pfam (PF03947) | Nicotiana tabacum (common tobacco) | |
75 | XB (q3) | 60S ribosomal protein L7-4-like | polymer | 242 | 28148.9 | 1 | UniProt (A0A1S4A5Z2) Pfam (PF08079) Pfam (PF00327) | Nicotiana tabacum (common tobacco) | |
76 | YB (r3) | uL3 (60S ribosomal protein L3) | polymer | 389 | 44507.2 | 1 | UniProt (A0A1S3ZLI9) Pfam (PF00297) | Nicotiana tabacum (common tobacco) | |
77 | ZB (s3) | uL4 (60S ribosomal protein L4) | polymer | 405 | 44706.9 | 1 | UniProt (A0A1S3X0M5) Pfam (PF00573) Pfam (PF14374) | Nicotiana tabacum (common tobacco) | |
78 | AC (t3) | uL5 (60S ribosomal protein L11) | polymer | 181 | 20794.2 | 1 | UniProt (A0A1S3XAW1) Pfam (PF00673) Pfam (PF00281) | Nicotiana tabacum (common tobacco) | |
79 | BC (u3) | uL6 (60S ribosomal protein L9) | polymer | 194 | 22057.6 | 1 | UniProt (A0A1S4C068) Pfam (PF00347) | Nicotiana tabacum (common tobacco) | |
80 | CC (l3) | nascent chain | polymer | 24 | 2060.5 | 1 | Nicotiana tabacum | ||
81 | DC (A3) | 25S rRNA | polymer | 3390 | 1098268.0 | 1 | Nicotiana tabacum | ||
82 | EC (B3) | 5.8S rRNA | polymer | 163 | 52563.3 | 1 | GenBank (1782605526) | Nicotiana tabacum (common tobacco) | |
83 | AD, AE, AI, AJ, BD... (h1, r3, A3, B1, C3...) | MAGNESIUM ION | non-polymer | 24.3 | 135 | Chemie (MG) | |||
84 | AF, AG, AH, AL, AM... (h1, U1, A3, V1, r3...) | POTASSIUM ION | non-polymer | 39.1 | 141 | Chemie (K) | |||
85 | AK, QG (A3, h1) | SPERMIDINE | non-polymer | 145.2 | 2 | Chemie (SPD) | |||
86 | BK, CK, RG, SG, TG (A3, h1) | SPERMINE | non-polymer | 202.3 | 5 | Chemie (SPM) | |||
87 | BH, MH, OH, QH, RH... (V1, V3, Y3, Z3, a3...) | ZINC ION | non-polymer | 65.4 | 7 | Chemie (ZN) | |||
88 | AO, AP, BO, BP, CO... (X1, V3, Y1, X3, Z1...) | water | water | 18.0 | 6792 | Chemie (HOH) |
Sequence modifications
B3: 1 - 163 (GenBank: 1782605526)
PDB | External Database | Details |
---|---|---|
U 85 | C 299 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 83 |
Total formula weight | 3252150.9 | |
Non-Polymers* | Number of molecules | 290 |
Total formula weight | 10554.0 | |
All* | Total formula weight | 3262704.9 |