8B0X
Translating 70S ribosome in the unrotated state (P and E, tRNAs)
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | 0 | 50S ribosomal protein L33 | polymer | 55 | 6388.6 | 1 | UniProt (P0A7N9) Pfam (PF00471) In PDB | Escherichia coli B | Large ribosomal subunit protein bL33 |
| 2 | 1 | 50S ribosomal protein L34 | polymer | 46 | 5397.5 | 1 | UniProt (P0A7P5) Pfam (PF00468) In PDB | Escherichia coli B | Large ribosomal subunit protein bL34 |
| 3 | 2 | 50S ribosomal protein L35 | polymer | 65 | 7313.0 | 1 | UniProt (P0A7Q1) Pfam (PF01632) In PDB | Escherichia coli B | Large ribosomal subunit protein bL35,Ribosomal protein A |
| 4 | 3 | 50S ribosomal protein L36 | polymer | 38 | 4377.4 | 1 | UniProt (P0A7Q6) Pfam (PF00444) In PDB | Escherichia coli B | Large ribosomal subunit protein bL36-A,Ribosomal protein B |
| 5 | A | 16S rRNA | polymer | 1554 | 503775.9 | 1 | GenBank (991965528) | Escherichia coli B | |
| 6 | B | 30S ribosomal protein S2 | polymer | 241 | 26781.7 | 1 | UniProt (P0A7V0) Pfam (PF00318) In PDB | Escherichia coli B | |
| 7 | C | 30S ribosomal protein S3 | polymer | 233 | 26031.3 | 1 | UniProt (P0A7V3) Pfam (PF07650) Pfam (PF00189) In PDB | Escherichia coli B | Small ribosomal subunit protein uS3 |
| 8 | D | 30S ribosomal protein S4 | polymer | 206 | 23514.2 | 1 | UniProt (P0A7V8) Pfam (PF00163) Pfam (PF01479) In PDB | Escherichia coli B | Small ribosomal subunit protein uS4 |
| 9 | E | 30S ribosomal protein S5 | polymer | 167 | 17629.4 | 1 | UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719) In PDB | Escherichia coli B | Small ribosomal subunit protein uS5 |
| 10 | F | 30S ribosomal protein S6 | polymer | 135 | 15727.5 | 1 | UniProt (P02358) Pfam (PF01250) In PDB | Escherichia coli B | |
| 11 | G | 30S ribosomal protein S7 | polymer | 179 | 20055.2 | 1 | UniProt (P02359) Pfam (PF00177) In PDB | Escherichia coli B | |
| 12 | H | 30S ribosomal protein S8 | polymer | 130 | 14146.6 | 1 | UniProt (P0A7W7) Pfam (PF00410) In PDB | Escherichia coli B | Small ribosomal subunit protein uS8 |
| 13 | I | 30S ribosomal protein S9 | polymer | 130 | 14886.3 | 1 | UniProt (P0A7X3) Pfam (PF00380) In PDB | Escherichia coli B | Small ribosomal subunit protein uS9 |
| 14 | J | 30S ribosomal protein S10 | polymer | 103 | 11755.6 | 1 | UniProt (P0A7R5) Pfam (PF00338) In PDB | Escherichia coli B | Small ribosomal subunit protein uS10,Transcription termination/antitermination protein NusE |
| 15 | K | 30S ribosomal protein S11 | polymer | 129 | 13872.0 | 1 | UniProt (P0A7R9) Pfam (PF00411) In PDB | Escherichia coli B | Small ribosomal subunit protein uS11 |
| 16 | L | 30S ribosomal protein S12 | polymer | 124 | 13814.2 | 1 | UniProt (P0A7S3) Pfam (PF00164) In PDB | Escherichia coli B | Small ribosomal subunit protein uS12 |
| 17 | M | 30S ribosomal protein S13 | polymer | 118 | 13128.5 | 1 | UniProt (P0A7S9) Pfam (PF00416) In PDB | Escherichia coli B | Small ribosomal subunit protein uS13 |
| 18 | N | 30S ribosomal protein S14 | polymer | 101 | 11606.6 | 1 | UniProt (P0AG59) Pfam (PF00253) In PDB | Escherichia coli B | Small ribosomal subunit protein uS14 |
| 19 | O | 30S ribosomal protein S15 | polymer | 89 | 10290.8 | 1 | UniProt (P0ADZ4) Pfam (PF00312) In PDB | Escherichia coli B | Small ribosomal subunit protein uS15 |
| 20 | P | 30S ribosomal protein S16 | polymer | 82 | 9207.6 | 1 | UniProt (P0A7T3) Pfam (PF00886) In PDB | Escherichia coli B | Small ribosomal subunit protein bS16 |
| 21 | Q | 30S ribosomal protein S17 | polymer | 84 | 9724.5 | 1 | UniProt (P0AG63) Pfam (PF00366) In PDB | Escherichia coli B | Small ribosomal subunit protein uS17 |
| 22 | R | 30S ribosomal protein S18 | polymer | 75 | 9005.5 | 1 | UniProt (P0A7T7) Pfam (PF01084) In PDB | Escherichia coli B | Small ribosomal subunit protein bS18 |
| 23 | S | 30S ribosomal protein S19 | polymer | 92 | 10455.4 | 1 | UniProt (P0A7U3) Pfam (PF00203) In PDB | Escherichia coli B | Small ribosomal subunit protein uS19 |
| 24 | T | 30S ribosomal protein S20 | polymer | 87 | 9708.5 | 1 | UniProt (P0A7U7) Pfam (PF01649) In PDB | Escherichia coli B | |
| 25 | U | 30S ribosomal protein S21 | polymer | 71 | 8524.0 | 1 | UniProt (P68679) Pfam (PF01165) In PDB | Escherichia coli B | Small ribosomal subunit protein bS21 |
| 26 | X | mRNA | polymer | 6 | 1923.2 | 1 | Escherichia coli B | ||
| 27 | Z | P-site tRNA | polymer | 77 | 24842.8 | 1 | GenBank (1804121330) | Escherichia coli B | |
| 28 | a | 23S rRNA | polymer | 2925 | 948625.9 | 1 | Escherichia coli B | ||
| 29 | b | 5S rRNA | polymer | 119 | 38483.9 | 1 | GenBank (1845258627) | Escherichia coli B | |
| 30 | c | 50S ribosomal protein L2 | polymer | 273 | 29923.6 | 1 | UniProt (P60422) Pfam (PF00181) Pfam (PF03947) In PDB | Escherichia coli B | Large ribosomal subunit protein uL2 |
| 31 | d | 50S ribosomal protein L3 | polymer | 209 | 22291.6 | 1 | UniProt (P60438) Pfam (PF00297) In PDB | Escherichia coli B | Large ribosomal subunit protein uL3 |
| 32 | e | 50S ribosomal protein L4 | polymer | 201 | 22121.6 | 1 | UniProt (P60723) Pfam (PF00573) In PDB | Escherichia coli B | Large ribosomal subunit protein uL4 |
| 33 | f | 50S ribosomal protein L5 | polymer | 179 | 20333.6 | 1 | UniProt (P62399) Pfam (PF00281) Pfam (PF00673) In PDB | Escherichia coli B | Large ribosomal subunit protein uL5 |
| 34 | g | 50S ribosomal protein L6 | polymer | 177 | 18932.8 | 1 | UniProt (P0AG55) Pfam (PF00347) In PDB | Escherichia coli B | Large ribosomal subunit protein uL6 |
| 35 | h | 50S ribosomal protein L9 | polymer | 149 | 15789.0 | 1 | UniProt (P0A7R1) Pfam (PF01281) Pfam (PF03948) In PDB | Escherichia coli B | Large ribosomal subunit protein bL9 |
| 36 | i | 50S ribosomal protein L13 | polymer | 142 | 16050.6 | 1 | UniProt (P0AA10) Pfam (PF00572) In PDB | Escherichia coli B | Large ribosomal subunit protein uL13 |
| 37 | j | 50S ribosomal protein L14 | polymer | 123 | 13565.1 | 1 | UniProt (P0ADY3) Pfam (PF00238) In PDB | Escherichia coli B | Large ribosomal subunit protein uL14 |
| 38 | k | 50S ribosomal protein L15 | polymer | 144 | 15008.5 | 1 | UniProt (P02413) Pfam (PF00828) In PDB | Escherichia coli B | Large ribosomal subunit protein uL15 |
| 39 | l | 50S ribosomal protein L16 | polymer | 136 | 15329.3 | 1 | UniProt (P0ADY7) Pfam (PF00252) In PDB | Escherichia coli B | Large ribosomal subunit protein uL16 |
| 40 | m | 50S ribosomal protein L17 | polymer | 127 | 14393.7 | 1 | UniProt (P0AG44) Pfam (PF01196) In PDB | Escherichia coli B | Large ribosomal subunit protein bL17 |
| 41 | n | 50S ribosomal protein L18 | polymer | 117 | 12794.7 | 1 | UniProt (P0C018) Pfam (PF00861) In PDB | Escherichia coli B | Large ribosomal subunit protein uL18 |
| 42 | o | 50S ribosomal protein L19 | polymer | 115 | 13159.3 | 1 | UniProt (P0A7K6) Pfam (PF01245) In PDB | Escherichia coli B | Large ribosomal subunit protein bL19 |
| 43 | p | 50S ribosomal protein L20 | polymer | 118 | 13528.0 | 1 | UniProt (P0A7L3) Pfam (PF00453) In PDB | Escherichia coli B | Large ribosomal subunit protein bL20 |
| 44 | q | 50S ribosomal protein L21 | polymer | 103 | 11586.4 | 1 | UniProt (P0AG48) Pfam (PF00829) In PDB | Escherichia coli B | Large ribosomal subunit protein bL21 |
| 45 | r | 50S ribosomal protein L22 | polymer | 110 | 12253.4 | 1 | UniProt (P61175) Pfam (PF00237) In PDB | Escherichia coli B | Large ribosomal subunit protein uL22 |
| 46 | s | 50S ribosomal protein L23 | polymer | 100 | 11222.2 | 1 | UniProt (P0ADZ0) Pfam (PF00276) In PDB | Escherichia coli B | Large ribosomal subunit protein uL23 |
| 47 | t | 50S ribosomal protein L24 | polymer | 104 | 11339.3 | 1 | UniProt (P60624) Pfam (PF00467) Pfam (PF17136) In PDB | Escherichia coli B | Large ribosomal subunit protein uL24 |
| 48 | u | 50S ribosomal protein L25 | polymer | 94 | 10713.5 | 1 | UniProt (P68919) Pfam (PF01386) In PDB | Escherichia coli B | Large ribosomal subunit protein bL25 |
| 49 | v | 50S ribosomal protein L27 | polymer | 85 | 9146.5 | 1 | UniProt (P0A7L8) Pfam (PF01016) In PDB | Escherichia coli B | Large ribosomal subunit protein bL27 |
| 50 | w | 50S ribosomal protein L28 | polymer | 78 | 9027.6 | 1 | UniProt (P0A7M2) Pfam (PF00830) In PDB | Escherichia coli B | Large ribosomal subunit protein bL28 |
| 51 | x | 50S ribosomal protein L29 | polymer | 63 | 7286.5 | 1 | UniProt (P0A7M6) Pfam (PF00831) In PDB | Escherichia coli B | Large ribosomal subunit protein uL29 |
| 52 | y | 50S ribosomal protein L30 | polymer | 59 | 6554.8 | 1 | UniProt (P0AG51) Pfam (PF00327) In PDB | Escherichia coli B | Large ribosomal subunit protein uL30 |
| 53 | z | 50S ribosomal protein L32 | polymer | 57 | 6463.4 | 1 | UniProt (P0A7N4) Pfam (PF01783) In PDB | Escherichia coli B | Large ribosomal subunit protein bL32 |
| 54 | 3 | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 55 | A, a, c, d, e... | POTASSIUM ION | non-polymer | 39.1 | 168 | Chemie (K) | |||
| 56 | A, a, c, d, z... | MAGNESIUM ION | non-polymer | 24.3 | 361 | Chemie (MG) | |||
| 57 | water | water | 18.0 | 11461 | Chemie (HOH) |
Sequence modifications
K: 1 - 130 (UniProt: P0A7R9)
Z: 1 - 76 (GenBank: 1804121330)
l: 1 - 136 (UniProt: P0ADY7)
| PDB | External Database | Details |
|---|---|---|
| Ias 119 | Asn 119 | modified residue |
| PDB | External Database | Details |
|---|---|---|
| U 34 | C 3792666 | conflict |
| C 36 | U 3792668 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ms6 82 | Met 82 | modified residue |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 53 |
| Total formula weight | 2169808.2 | |
| Non-Polymers* | Number of molecules | 530 |
| Total formula weight | 15408.0 | |
| All* | Total formula weight | 2185216.2 |
