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8B0A

Cryo-EM structure of ALC1 bound to an asymmetric, site-specifically PARylated nucleosome

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1KChromodomain-helicase-DNA-binding protein 1-likepolymer87298906.81UniProt (Q86WJ1)
Pfam (PF00176)
Pfam (PF00271)
In PDB
Homo sapiens (human)Amplified in liver cancer protein 1
2A, EHistone H3polymer13615403.12UniProt (A0A310TTQ1)
Pfam (PF00125)
UniProt (by SIFTS) (P84233)
In PDB
Xenopus laevis (African clawed frog)
3B, FHistone H4polymer10311394.42UniProt (P62799)
Pfam (PF15511)
In PDB
Xenopus laevis (African clawed frog)
4C, GHistone H2A type 1polymer13014109.42UniProt (P06897)
Pfam (PF00125)
Pfam (PF16211)
In PDB
Xenopus laevis (African clawed frog)
5D, HHistone H2B 1.1polymer12313655.92UniProt (P02281)
Pfam (PF00125)
In PDB
Xenopus laevis (African clawed frog)H2B1.1
6IDNA (149-MER) Widom 601 sequencepolymer16049175.31synthetic construct
7JDNA (149-MER) Widom 601 sequencepolymer16049606.61synthetic construct
Sequence modifications
K: 16 - 879 (UniProt: Q86WJ1)
PDBExternal DatabaseDetails
Met 15-initiating methionine
Ala 880-expression tag
His 881-expression tag
His 882-expression tag
His 883-expression tag
His 884-expression tag
His 885-expression tag
His 886-expression tag
A, E: 0 - 135 (UniProt: A0A310TTQ1)
PDBExternal DatabaseDetails
Ala 110Cys 111engineered mutation
C, G: 0 - 129 (UniProt: P06897)
PDBExternal DatabaseDetails
Arg 99Gly 100conflict
Ser 123Ala 124conflict
D, H: 1 - 122 (UniProt: P02281)
PDBExternal DatabaseDetails
Met 0-initiating methionine
Thr 29Ser 33conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains11
Total formula weight306814.4
All*Total formula weight306814.4
*Water molecules are not included.

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PDB entries from 2024-07-24

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