8APY
Crystal structure of the H12A variant of the KDEL receptor bound to sybody
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | ER lumen protein-retaining receptor 2 | polymer | 212 | 24409.8 | 1 | UniProt (Q5ZKX9) Pfam (PF00810) | Gallus gallus (chicken) | KDEL endoplasmic reticulum protein retention receptor 2,KDEL receptor 2 |
| 2 | B (C) | Synthetic nanobody | polymer | 121 | 13611.1 | 1 | synthetic construct | ||
| 3 | C (A) | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate | non-polymer | 356.5 | 1 | Chemie (OLC) | |||
| 4 | D, E (A, C) | water | water | 18.0 | 17 | Chemie (HOH) |
Sequence modifications
A: 1 - 212 (UniProt: Q5ZKX9)
| PDB | External Database | Details |
|---|---|---|
| Ala 12 | His 12 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 38020.9 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 356.5 | |
| All* | Total formula weight | 38377.5 |
