8APF

rotational state 2a of the Trypanosoma brucei mitochondrial ATP synthase dimer

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	H1	ATP synthase, epsilon chain, putative	polymer	182	20172.9	1	UniProt (Q586H1) Pfam (PF02823) In PDB	Trypanosoma brucei brucei
2	I1	ATP synthase subunit epsilon, mitochondrial	polymer	75	8706.9	1	UniProt (P0DPG3) Pfam (PF04627) In PDB	Trypanosoma brucei brucei	ATP synthase F1 subunit epsilon
3	J1, K1, L1	ATP synthase subunit p18, mitochondrial	polymer	188	21268.3	3	UniProt (P0DPG4) In PDB	Trypanosoma brucei brucei	ATP synthase F1 subunit p18
4	L, l	subunit-e	polymer	92	10448.9	2	UniProt (Q387J1) In PDB	Trypanosoma brucei brucei
5	M, m	subunit-g	polymer	144	16092.7	2	UniProt (C9ZJA0) In PDB	Trypanosoma brucei brucei
6	M1	OSCP	polymer	255	28869.9	1	UniProt (Q38AG1) Pfam (PF00213) In PDB	Trypanosoma brucei brucei
7	O1, P1, Q1, R1, S1...	ATPase subunit 9, putative	polymer	118	12398.9	10	UniProt (Q38C84) Pfam (PF00137) In PDB	Trypanosoma brucei brucei
8	a	ATP synthase subunit a	polymer	231	28708.4	1	UniProt (P24499) In PDB	Trypanosoma brucei brucei	F-ATPase protein 6
9	c	subunit-8	polymer	114	13751.0	1	UniProt (Q585K5) In PDB	Trypanosoma brucei brucei
10	d	subunit-d	polymer	370	43379.3	1	UniProt (Q57ZW9) In PDB	Trypanosoma brucei brucei
11	e	ATPTB1	polymer	396	46883.6	1	UniProt (Q38CI8) In PDB	Trypanosoma brucei brucei
12	f	subunit-f	polymer	145	17182.7	1	UniProt (Q57ZE2) In PDB	Trypanosoma brucei brucei
13	g	ATPTB3	polymer	269	27646.6	1	UniProt (A0A3L6KRX7) In PDB	Trypanosoma brucei brucei
14	h	ATPTB4	polymer	157	17218.7	1	UniProt (Q389Z3) In PDB	Trypanosoma brucei brucei
15	i	subunit-i/j	polymer	104	12661.6	1	UniProt (Q57ZM4) In PDB	Trypanosoma brucei brucei
16	j	ATPTB6	polymer	169	20307.4	1	UniProt (D0A5R7) In PDB	Trypanosoma brucei brucei
17	k	subunit-k	polymer	124	14531.1	1	UniProt (Q57VT0) In PDB	Trypanosoma brucei brucei
18	n	ATPTB11	polymer	156	17929.6	1	UniProt (Q582T1) In PDB	Trypanosoma brucei brucei
19	o	ATPTB12	polymer	101	11676.3	1	UniProt (Q57Z84) In PDB	Trypanosoma brucei brucei
20	p	subunit-b	polymer	105	12325.3	1	UniProt (C9ZLR9) In PDB	Trypanosoma brucei brucei
21	q	ATPEG3	polymer	98	12293.8	1	UniProt (Q583U4) In PDB	Trypanosoma brucei brucei
22	r	ATPEG4	polymer	62	7649.8	1		Trypanosoma brucei brucei
23	G1	ATP synthase gamma subunit	polymer	305	34472.3	1	UniProt (A0A161CM65) Pfam (PF00231) In PDB	Trypanosoma brucei brucei
24	A1, B1, C1	ATP synthase subunit alpha, mitochondrial	polymer	584	63574.5	3	UniProt (Q9GS23) Pfam (PF00006) Pfam (PF00306) In PDB	Trypanosoma brucei brucei	ATP synthase F1 subunit alpha
25	D1, E1, F1	ATP synthase subunit beta, mitochondrial	polymer	519	55836.9	3	UniProt (Q9GPE9) Pfam (PF02874) Pfam (PF00006) Pfam (PF22919) In PDB	Trypanosoma brucei brucei	ATP synthase F1 subunit beta
26	f, j, l, m, q...	CARDIOLIPIN	non-polymer		1464.0	14	Chemie (CDL)
27	f, m, M	1,2-dioleoyl-sn-glycero-3-phosphoethanolamine	non-polymer		744.0	3	Chemie (PEE)
28	j, e	DODECYL-BETA-D-MALTOSIDE	non-polymer		510.6	2	Chemie (LMT)
29	e, n	2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside	non-polymer		1165.3	2	Chemie (Q7G)
30	f, i, j, p	1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE	non-polymer		790.1	4	Chemie (PC1)
31	G1	URIDINE 5'-TRIPHOSPHATE	non-polymer		484.1	1	Chemie (UTP)
32	A1, B1, C1, D1	ADENOSINE-5'-TRIPHOSPHATE	non-polymer		507.2	4	Chemie (ATP)
33	A1, B1, C1, D1, E1	MAGNESIUM ION	non-polymer		24.3	5	Chemie (MG)
34	E1	ADENOSINE-5'-DIPHOSPHATE	non-polymer		427.2	1	Chemie (ADP)

Sequence modifications

a: 1 - 231 (UniProt: P24499)

PDB	External Database	Details
Trp 23	-	insertion
Trp 180	-	insertion

g: 1 - 269 (UniProt: A0A3L6KRX7)

PDB	External Database	Details
Ala 176	Val 176	conflict

Contents of the asymmetric unit

Polymers	Number of chains	42
	Total formula weight	995478.0
Non-Polymers*	Number of molecules	36
	Total formula weight	32302.7
All*	Total formula weight	1027780.7

*Water molecules are not included.