8APD
rotational state 1d of the Trypanosoma brucei mitochondrial ATP synthase dimer
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, M (L, l) | subunit-e | polymer | 92 | 10448.9 | 2 | UniProt (Q387J1) | Trypanosoma brucei brucei | |
| 2 | B, N (M, m) | subunit-g | polymer | 144 | 16092.7 | 2 | UniProt (C9ZJA0) | Trypanosoma brucei brucei | |
| 3 | C (a) | ATP synthase subunit a | polymer | 231 | 28708.4 | 1 | UniProt (P24499) | Trypanosoma brucei brucei | F-ATPase protein 6 |
| 4 | D (c) | subunit-8 | polymer | 114 | 13751.0 | 1 | UniProt (Q585K5) | Trypanosoma brucei brucei | |
| 5 | E (d) | subunit-d | polymer | 370 | 43379.3 | 1 | UniProt (Q57ZW9) | Trypanosoma brucei brucei | |
| 6 | F (e) | ATPTB1 | polymer | 396 | 46883.6 | 1 | UniProt (Q38CI8) | Trypanosoma brucei brucei | |
| 7 | G (f) | subunit-f | polymer | 145 | 17182.7 | 1 | UniProt (Q57ZE2) | Trypanosoma brucei brucei | |
| 8 | H (g) | ATPTB3 | polymer | 269 | 27646.6 | 1 | UniProt (A0A3L6KRX7) | Trypanosoma brucei brucei | |
| 9 | I (h) | ATPTB4 | polymer | 157 | 17218.7 | 1 | UniProt (Q389Z3) | Trypanosoma brucei brucei | |
| 10 | J (i) | subunit-i/j | polymer | 104 | 12661.6 | 1 | UniProt (Q57ZM4) | Trypanosoma brucei brucei | |
| 11 | K (j) | ATPTB6 | polymer | 169 | 20307.4 | 1 | UniProt (D0A5R7) | Trypanosoma brucei brucei | |
| 12 | L (k) | subunit-k | polymer | 124 | 14531.1 | 1 | UniProt (Q57VT0) | Trypanosoma brucei brucei | |
| 13 | O (n) | ATPTB11 | polymer | 156 | 17929.6 | 1 | UniProt (Q582T1) | Trypanosoma brucei brucei | |
| 14 | P (o) | ATPTB12 | polymer | 101 | 11676.3 | 1 | UniProt (Q57Z84) | Trypanosoma brucei brucei | |
| 15 | Q (p) | subunit-b | polymer | 105 | 12325.3 | 1 | UniProt (C9ZLR9) | Trypanosoma brucei brucei | |
| 16 | R (q) | ATPEG3 | polymer | 98 | 12293.8 | 1 | UniProt (Q583U4) | Trypanosoma brucei brucei | |
| 17 | S (r) | ATPEG4 | polymer | 62 | 7649.8 | 1 | Trypanosoma brucei brucei | ||
| 18 | T, U, V (A1, B1, C1) | ATP synthase subunit alpha, mitochondrial | polymer | 584 | 63574.5 | 3 | UniProt (Q9GS23) Pfam (PF00006) Pfam (PF00306) | Trypanosoma brucei brucei | ATP synthase F1 subunit alpha |
| 19 | W, X, Y (D1, E1, F1) | ATP synthase subunit beta, mitochondrial | polymer | 519 | 55836.9 | 3 | UniProt (Q9GPE9) Pfam (PF02874) Pfam (PF00006) Pfam (PF22919) | Trypanosoma brucei brucei | ATP synthase F1 subunit beta |
| 20 | Z (G1) | ATP synthase gamma subunit | polymer | 305 | 34472.3 | 1 | UniProt (A0A161CM65) Pfam (PF00231) | Trypanosoma brucei brucei | |
| 21 | AA (H1) | ATP synthase, epsilon chain, putative | polymer | 182 | 20172.9 | 1 | UniProt (Q586H1) Pfam (PF02823) | Trypanosoma brucei brucei | |
| 22 | BA (I1) | ATP synthase subunit epsilon, mitochondrial | polymer | 75 | 8706.9 | 1 | UniProt (P0DPG3) Pfam (PF04627) | Trypanosoma brucei brucei | ATP synthase F1 subunit epsilon |
| 23 | CA, DA, EA (J1, K1, L1) | ATP synthase subunit p18, mitochondrial | polymer | 188 | 21268.3 | 3 | UniProt (P0DPG4) | Trypanosoma brucei brucei | ATP synthase F1 subunit p18 |
| 24 | FA (M1) | OSCP | polymer | 255 | 28869.9 | 1 | UniProt (Q38AG1) Pfam (PF00213) | Trypanosoma brucei brucei | |
| 25 | GA, HA, IA, JA, KA... (O1, P1, Q1, R1, S1...) | ATPase subunit 9, putative | polymer | 118 | 12398.9 | 10 | UniProt (Q38C84) Pfam (PF00137) | Trypanosoma brucei brucei | |
| 26 | CB, HB, IB, KB, LB... (f, j, l, m, q...) | CARDIOLIPIN | non-polymer | 1464.0 | 14 | Chemie (CDL) | |||
| 27 | DB, MB, SA (f, m, M) | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine | non-polymer | 744.0 | 3 | Chemie (PEE) | |||
| 28 | EB, FB, GB, TA (f, i, a) | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE | non-polymer | 790.1 | 4 | Chemie (PC1) | |||
| 29 | AB, JB (e, j) | DODECYL-BETA-D-MALTOSIDE | non-polymer | 510.6 | 2 | Chemie (LMT) | |||
| 30 | BB, NB (e, n) | 2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside | non-polymer | 1165.3 | 2 | Chemie (Q7G) | |||
| 31 | PB, RB, TB, XB (A1, B1, C1, F1) | ADENOSINE-5'-TRIPHOSPHATE | non-polymer | 507.2 | 4 | Chemie (ATP) | |||
| 32 | QB, SB, UB, WB, YB (A1, B1, C1, D1, F1) | MAGNESIUM ION | non-polymer | 24.3 | 5 | Chemie (MG) | |||
| 33 | VB (D1) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
| 34 | ZB (H1) | URIDINE 5'-TRIPHOSPHATE | non-polymer | 484.1 | 1 | Chemie (UTP) |
Sequence modifications
a: 1 - 231 (UniProt: P24499)
g: 1 - 269 (UniProt: A0A3L6KRX7)
| PDB | External Database | Details |
|---|---|---|
| Trp 23 | - | insertion |
| Trp 180 | - | insertion |
| PDB | External Database | Details |
|---|---|---|
| Ala 176 | Val 176 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 42 |
| Total formula weight | 995478.0 | |
| Non-Polymers* | Number of molecules | 36 |
| Total formula weight | 32302.7 | |
| All* | Total formula weight | 1027780.7 |
