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8AI1

Crystal structure of radical SAM epimerase EpeE from Bacillus subtilis with [4Fe-4S] clusters and S-adenosyl-L-homocysteine bound.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Putative peptide biosynthesis protein YydGpolymer34439952.42UniProt (Q45595)
Pfam (PF13353)
Pfam (PF04055)
Bacillus subtilis
2C, D, M, N
(A, B)
IRON/SULFUR CLUSTERnon-polymer351.64Chemie (SF4)
3E, O
(A, B)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.42Chemie (SAH)
4F, L, P, Q, R...
(A, B)
1,2-ETHANEDIOLnon-polymer62.113Chemie (EDO)
5AA, G, H, I, J...
(B, A)
DI(HYDROXYETHYL)ETHERnon-polymer106.16Chemie (PEG)
6BA, CA
(A, B)
waterwater18.0179Chemie (HOH)
Sequence modifications
A, B: 1 - 319 (UniProt: Q45595)
PDBExternal DatabaseDetails
Met -24-initiating methionine
Ala -23-expression tag
Ser -22-expression tag
Trp -21-expression tag
Ser -20-expression tag
His -19-expression tag
Pro -18-expression tag
Gln -17-expression tag
Phe -16-expression tag
Glu -15-expression tag
Lys -14-expression tag
Ser -13-expression tag
Gly -12-expression tag
Gly -11-expression tag
Gly -10-expression tag
Gly -9-expression tag
Gly -8-expression tag
Glu -7-expression tag
Asn -6-expression tag
Leu -5-expression tag
Tyr -4-expression tag
Phe -3-expression tag
Gln -2-expression tag
Gly -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight79904.9
Non-Polymers*Number of molecules25
Total formula weight3619.0
All*Total formula weight83523.9
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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