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8AFD

CRYSTAL STRUCTURE OF BIT-BLOCKED KRAS-G12V-S39C IN COMPLEX WITH COMPOUND 20a

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
GTPase KRaspolymer17019370.94UniProt (P01116)
Pfam (PF00071)
Homo sapiens (human)K-Ras 2,Ki-Ras,c-K-ras,c-Ki-ras
2E, I, M, P
(A, B, C, D)
GUANOSINE-5'-DIPHOSPHATEnon-polymer443.24Chemie (GDP)
PubChem (136073927)
PubChem (135398619)
PubChem (135402030)
PubChem (135431654)
PubChem (135566337)
PubChem (135760556)
PubChem (136026707)
PubChem (136053418)
PubChem (136663964)
PubChem (136664748)
PubChem (136759848)
PubChem (136759849)
PubChem (136759850)
PubChem (136836636)
PubChem (136847074)
PubChem (172898537)
3F, K, O, R
(A, B, C, D)
1H-benzimidazol-2-ylmethanethiolnon-polymer164.24Chemie (2XO)
4G, J, N, Q
(A, B, C, D)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
PubChem (888)
5H, L
(A, B)
(4~{S})-4-[3-(4-aminophenyl)-1,2,4-oxadiazol-5-yl]-2-azanyl-4-methyl-6,7-dihydro-5~{H}-1-benzothiophene-3-carbonitrilenon-polymer351.42Chemie (LXU)
PubChem (165416411)
6S, T, U, V
(A, B, C, D)
waterwater18.0394Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 164 (UniProt: P01116)
PDBExternal DatabaseDetails
Gly 0-expression tag
Val 12Gly 12engineered mutation
Cys 39Ser 39engineered mutation
Ser 118Cys 118engineered mutation
Gly 151Arg 151engineered mutation
Asp 153Glu 153engineered mutation
Lys 165-expression tag
His 166-expression tag
Lys 167-expression tag
Glu 168-expression tag
Lys 169-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight77483.6
Non-Polymers*Number of molecules14
Total formula weight3229.8
All*Total formula weight80713.4
*Water molecules are not included.

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PDB entries from 2026-05-13

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