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8ABZ

RNA polymerase at U-rich pause bound to non-regulatory RNA - pause prone, closed clamp state

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
DNA-directed RNA polymerase subunit alphapolymer32936558.72UniProt (P0A7Z4)
Pfam (PF01193)
Pfam (PF01000)
Pfam (PF03118)
Escherichia coli K-12RNAP subunit alpha,RNA polymerase subunit alpha,Transcriptase subunit alpha
2C
(C)
DNA-directed RNA polymerase subunit betapolymer1342150820.91UniProt (P0A8V2)
Pfam (PF04560)
Pfam (PF04563)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF10385)
Pfam (PF00562)
Escherichia coli K-12RNAP subunit beta,RNA polymerase subunit beta,Transcriptase subunit beta
3D
(D)
DNA-directed RNA polymerase subunit beta'polymer1406155237.71UniProt (C3SIA2)
Pfam (PF04997)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
UniProt (by SIFTS) (P0A8T7)
Escherichia coli K-12RNAP subunit beta',RNA polymerase subunit beta',Transcriptase subunit beta'
4E
(E)
DNA-directed RNA polymerase subunit omegapolymer9110249.51UniProt (P0A800)
Pfam (PF01192)
Escherichia coli K-12RNAP omega subunit,RNA polymerase omega subunit,Transcriptase subunit omega
5F
(N)
Non-template DNApolymer29591015.11Escherichia coli K-12
6G
(R)
Non-regulatory RNApolymer12239226.31Escherichia coli
7H
(T)
Template DNApolymer29591180.21Escherichia coli K-12
8I
(D)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
9J, K
(D)
ZINC IONnon-polymer65.42Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight610847.1
Non-Polymers*Number of molecules3
Total formula weight155.1
All*Total formula weight611002.2
*Water molecules are not included.

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PDB entries from 2025-06-11

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