8A94
SARS CoV2 Spike in the 2-up state in complex with Fab47.
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | SARS-CoV2 Spike in 2-up conformation in complex with Fab47 | polymer | 1288 | 142395.4 | 3 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) | Severe acute respiratory syndrome coronavirus | |
| 2 | D, F, H (R, T, K) | Fab47 (Heavy chain Variable domain) | polymer | 123 | 13520.1 | 3 | Homo sapiens (human) | ||
| 3 | E, G, I (O, Q, E) | Fab47 (Light chain Variable domain) | polymer | 106 | 11398.6 | 3 | Homo sapiens (human) | ||
| 4 | J, K, L, M, N... (G, H, I, J, L...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 7 | In PDB GlyTouCan (G42666HT) | |||
| 5 | AA, AB, BA, BB, CA... (A, C, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 43 | Chemie (NAG) |
Sequence modifications
A, B, C: 1 - 1208 (UniProt: P0DTC2)
A, B, C: 1209 - 1288 (PDB: 8A94)
| PDB | External Database | Details |
|---|---|---|
| Ala 333 | Thr 333 | conflict |
| Gly 682 | Arg 682 | conflict |
| Ser 683 | Arg 683 | conflict |
| Ser 685 | Arg 685 | conflict |
| Pro 899 | Ala 899 | conflict |
| Pro 986 | Lys 986 | conflict |
| Pro 987 | Val 987 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 501942.1 | |
| Branched | Number of molecules | 7 |
| Total formula weight | 2970.8 | |
| Non-Polymers* | Number of molecules | 43 |
| Total formula weight | 9511.9 | |
| All* | Total formula weight | 514424.8 |
