8A45
Structural analysis of 1-deoxy-D-xylulose 5-phosphate synthase from Pseudomonas aeruginosa with 2-acetyl thiamine diphosphate
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D, E... | 1-deoxy-D-xylulose-5-phosphate synthase | polymer | 622 | 67223.4 | 6 | UniProt (B7V7R4) Pfam (PF13292) Pfam (PF02779) Pfam (PF02780) In PDB | Pseudomonas aeruginosa LESB58 | 1-deoxyxylulose-5-phosphate synthase,DXP synthase,DXPS |
2 | F, A, B, C, D... | 2-ACETYL-THIAMINE DIPHOSPHATE | non-polymer | 467.4 | 6 | Chemie (HTL) | |||
3 | F, A, B, C, D... | MAGNESIUM ION | non-polymer | 24.3 | 6 | Chemie (MG) | |||
4 | E, F, A, D | CALCIUM ION | non-polymer | 40.1 | 12 | Chemie (CA) | |||
5 | E, A, B, C | SODIUM ION | non-polymer | 23.0 | 4 | Chemie (NA) | |||
6 | water | water | 18.0 | 2192 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 234 (PDB: 8A45)
A, B, C, D, E, F: 242 - 622 (UniProt: B7V7R4)
PDB | External Database | Details |
---|---|---|
Gly 235 | - | linker |
Gly 236 | - | linker |
Gly 237 | - | linker |
Gly 238 | - | linker |
Gly 239 | - | linker |
Gly 240 | - | linker |
Pro 241 | - | linker |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 403340.3 | |
Non-Polymers* | Number of molecules | 28 |
Total formula weight | 3522.8 | |
All* | Total formula weight | 406863.1 |