8A1O
Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with acrylamide analogue 8
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | L,D-transpeptidase 2 | polymer | 355 | 38009.1 | 1 | UniProt (O53223) Pfam (PF17964) Pfam (PF03734) UniProt (by SIFTS) (I6Y9J2) | Mycobacterium tuberculosis | LDT 2,Ldt(Mt2) |
| 2 | B (A) | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 1 | Chemie (DMS) | |||
| 3 | C (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 4 | D (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 5 | E (A) | (E)-3-chloranyl-3-[(2-chlorophenyl)methylsulfonyl]-N-(5-methoxypyridin-2-yl)prop-2-enamide | non-polymer | 401.3 | 1 | Chemie (KTI) | |||
| 6 | F (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 7 | G, H (A) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 8 | I (A) | water | water | 18.0 | 428 | Chemie (HOH) |
Sequence modifications
A: 56 - 408 (UniProt: O53223)
| PDB | External Database | Details |
|---|---|---|
| Gln 54 | - | expression tag |
| Ser 55 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 38009.1 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 727.5 | |
| All* | Total formula weight | 38736.6 |
