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7ZKN

X-ray structure of the complex between human alpha thrombin and a pseudo-cyclic thrombin binding aptamer (TBA-NNp/DDp) - Crystal form gamma

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, CThrombin light chainpolymer364096.52UniProt (P00734)
Pfam (PF09396)
In PDB
Homo sapiens (human)
2B, DThrombin heavy chainpolymer25929780.22UniProt (P00734)
Pfam (PF00089)
In PDB
Homo sapiens (human)
3E, F, G, ITBA-NNp/DDppolymer154743.14synthetic construct
4H, J2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.42In PDB
GlyTouCan (G42666HT)
5B, DD-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamidenon-polymer454.02Chemie (0G6)
6E, F, G, I3-[13-methyl-5,7,12,14-tetrakis(oxidanylidene)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1(15),2,4(16),8,10-pentaen-6-yl]propyl 3-[5,7,12,14-tetrakis(oxidanylidene)-13-(3-oxidanylpropyl)-6,13-diazatetracyclo[6.6.2.0^{4,16}.0^{11,15}]hexadeca-1,3,8(16),9,11(15)-pentaen-6-yl]propyl hydrogen phosphatenon-polymer1044.74Chemie (JL0)
7E, F, G, I3-[5-[3-bis(oxidanyl)phosphanyloxypropoxy]naphthalen-1-yl]oxypropyl 3-(5-oxidanylnaphthalen-1-yl)oxypropyl hydrogen phosphatenon-polymer620.54Chemie (JKR)
8E, F, G, IPOTASSIUM IONnon-polymer39.14Chemie (K)
9waterwater18.029Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight86725.7
BranchedNumber of molecules2
Total formula weight848.8
Non-Polymers*Number of molecules14
Total formula weight7725.4
All*Total formula weight95299.9
*Water molecules are not included.

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PDB entries from 2024-07-10

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