7ZFC
SARS-CoV-2 Beta RBD in complex with nanobody C1, Omi-18 and Omi-31 Fabs
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (H) | Omi-31 heavy chain | polymer | 233 | 24802.9 | 1 | Homo sapiens (human) | ||
| 2 | B (L) | Omi-31 light chain | polymer | 216 | 22780.1 | 1 | Homo sapiens (human) | ||
| 3 | C (M) | Nanobody C1 | polymer | 131 | 14659.1 | 1 | Lama glama | ||
| 4 | D (A) | Omi-18 heavy chain | polymer | 222 | 23376.3 | 1 | Homo sapiens (human) | ||
| 5 | E (B) | Omi-18 light chain | polymer | 213 | 22833.0 | 1 | Homo sapiens (human) | ||
| 6 | F (E) | Spike protein S1 | polymer | 202 | 22897.7 | 1 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus 2 | SARS-CoV-2 Beta Spike protein |
| 7 | G (C) | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 1 | In PDB GlyTouCan (G86851RC) |
Sequence modifications
E: 333 - 526 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| His 327 | - | expression tag |
| His 328 | - | expression tag |
| His 329 | - | expression tag |
| His 330 | - | expression tag |
| His 331 | - | expression tag |
| His 332 | - | expression tag |
| Asn 417 | Lys 417 | variant |
| Lys 484 | Glu 484 | variant |
| Tyr 501 | Asn 501 | variant |
| Lys 527 | - | expression tag |
| Lys 528 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 131349.1 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 367.3 | |
| All* | Total formula weight | 131716.5 |
