7ZFA
SARS-CoV-2 Omicron RBD in complex with Omi-6 and COVOX-150 Fabs
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (D, B, C, A) | Spike protein S1 | polymer | 202 | 23157.2 | 4 | UniProt (P0DTC2) Pfam (PF09408) | Severe acute respiratory syndrome coronavirus 2 | SARS-CoV-2 Omicron Spike protein |
| 2 | E, H, S, T (E, M, J, H) | Omi-6 heavy chain | polymer | 229 | 24297.2 | 4 | Homo sapiens (human) | ||
| 3 | F, G, I, J (F, K, N, L) | Omi-6 light chain | polymer | 214 | 23218.8 | 4 | Homo sapiens (human) | ||
| 4 | K, M, O, Q (X, S, O, Q) | COVOX-150 heavy chain | polymer | 222 | 23415.3 | 4 | Homo sapiens (human) | ||
| 5 | L, N, P, R (Y, T, P, R) | COVOX-150 light chain | polymer | 216 | 23456.0 | 4 | Homo sapiens (human) |
Sequence modifications
D, B, C, A: 333 - 526 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| His 327 | - | expression tag |
| His 328 | - | expression tag |
| His 329 | - | expression tag |
| His 330 | - | expression tag |
| His 331 | - | expression tag |
| His 332 | - | expression tag |
| Asp 339 | Gly 339 | variant |
| Leu 371 | Ser 371 | variant |
| Pro 373 | Ser 373 | variant |
| Phe 375 | Ser 375 | variant |
| Asn 417 | Lys 417 | variant |
| Lys 440 | Asn 440 | variant |
| Ser 446 | Gly 446 | variant |
| Asn 477 | Ser 477 | variant |
| Lys 478 | Thr 478 | variant |
| Ala 484 | Glu 484 | variant |
| Arg 493 | Gln 493 | variant |
| Ser 496 | Gly 496 | variant |
| Arg 498 | Gln 498 | conflict |
| Tyr 501 | Asn 501 | variant |
| His 505 | Tyr 505 | variant |
| Lys 527 | - | expression tag |
| Lys 528 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 20 |
| Total formula weight | 470178.2 | |
| All* | Total formula weight | 470178.2 |






