7Z53
Structure of native leukocyte myeloperoxidase in complex with a truncated version (SPIN truncated) of the Staphyloccal Peroxidase Inhibitor SPIN from Staphylococcus aureus
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, G, I, M... | Myeloperoxidase light chain | polymer | 106 | 12075.5 | 8 | UniProt (P05164) In PDB | Homo sapiens (human) | |
| 2 | B, D, H, J, N... | Myeloperoxidase heavy chain | polymer | 466 | 53234.2 | 8 | UniProt (P05164) Pfam (PF03098) In PDB | Homo sapiens (human) | |
| 3 | E, F, K, L, Q... | Myeloperoxidase inhibitor SPIN | polymer | 59 | 6793.5 | 8 | UniProt (A0A8E8QUP3) UniProt (by SIFTS) (Q2G0X2) In PDB | Staphylococcus aureus | |
| 4 | f, l, o, r, Y | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 5 | In PDB GlyTouCan (G15407YE) | |||
| 5 | Z | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G22573RC) | |||
| 6 | a, c, e, h, k... | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1057.0 | 8 | In PDB GlyTouCan (G82348BZ) | |||
| 7 | b, d, g, m, p... | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 6 | In PDB GlyTouCan (G42666HT) | |||
| 8 | i | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G81315DD) | |||
| 9 | j | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G22768VO) | |||
| 10 | G, I, M, O, S... | CHLORIDE ION | non-polymer | 35.5 | 8 | Chemie (CL) | |||
| 11 | G, I, M, O, S... | HEME C | non-polymer | 618.5 | 8 | Chemie (HEC) | |||
| 12 | D, H, J, N, P... | CALCIUM ION | non-polymer | 40.1 | 8 | Chemie (CA) | |||
| 13 | B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
| 14 | D, H, P | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) | |||
| 15 | D | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
| 16 | P | OXALATE ION | non-polymer | 88.0 | 1 | Chemie (OXL) | |||
| 17 | water | water | 18.0 | 1068 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 24 |
| Total formula weight | 576826.0 | |
| Branched | Number of molecules | 22 |
| Total formula weight | 16343.0 | |
| Non-Polymers* | Number of molecules | 31 |
| Total formula weight | 6646.2 | |
| All* | Total formula weight | 599815.3 |
