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7Z3L

Autotaxin in complex with hybrid compound ziritaxestat (GLPG1690)

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(AAA)
Isoform 2 of Ectonucleotide pyrophosphatase/phosphodiesterase family member 2polymer80592590.11UniProt (Q64610)
Pfam (PF01033)
Pfam (PF01663)
Pfam (PF01223)
Rattus norvegicus (Norway rat)E-NPP 2,Autotaxin,Extracellular lysophospholipase D,LysoPLD
2B
(AcA)
alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranosebranched1153.01In PDB
3C, D
(AAA)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
4E, F
(AAA)
ZINC IONnon-polymer65.42Chemie (ZN)
5G
(AAA)
CALCIUM IONnon-polymer40.11Chemie (CA)
6H, I, J, K, L...
(AAA)
IODIDE IONnon-polymer126.910Chemie (IOD)
7GA, R, S, T, U...
(AAA)
THIOCYANATE IONnon-polymer58.19Chemie (SCN)
8Z
(AAA)
SODIUM IONnon-polymer23.01Chemie (NA)
9AA, BA, CA, DA, EA...
(AAA)
GLYCEROLnon-polymer92.16Chemie (GOL)
10HA
(AAA)
2-[[2-ethyl-8-methyl-6-[4-[2-(3-oxidanylazetidin-1-yl)-2-oxidanylidene-ethyl]piperazin-1-yl]imidazo[1,2-a]pyridin-3-yl]-methyl-amino]-4-(4-fluorophenyl)-1,3-thiazole-5-carbonitrilenon-polymer588.71Chemie (7NB)
11IA
(AAA)
waterwater18.0104Chemie (HOH)
Sequence modifications
AAA: 56 - 860 (UniProt: Q64610)
PDBExternal DatabaseDetails
Ala 410Asn 410engineered mutation
Thr 591Arg 591engineered mutation
Ala 806Asn 806engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight92590.1
BranchedNumber of molecules1
Total formula weight1153.0
Non-Polymers*Number of molecules32
Total formula weight3569.3
All*Total formula weight97312.5
*Water molecules are not included.

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PDB entries from 2025-06-18

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