7YRD
histone methyltransferase
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, G (A, E) | Histone H3.2 | polymer | 103 | 12046.1 | 2 | UniProt (P84233) Pfam (PF00125) UniProt (by SIFTS) (Q71DI3) | Xenopus laevis (African clawed frog) | |
| 2 | B, H (B, F) | Histone H4 | polymer | 102 | 11265.2 | 2 | UniProt (P62799) Pfam (PF15511) UniProt (by SIFTS) (P62805) | Xenopus laevis (African clawed frog) | |
| 3 | C, D (I, J) | DNA (146-MER) | polymer | 146 | 45054.8 | 2 | Homo sapiens | ||
| 4 | E, I (C, G) | Histone H2A.Z | polymer | 113 | 12091.1 | 2 | UniProt (P0C0S5) Pfam (PF00125) Pfam (PF16211) | Homo sapiens (human) | H2A/z |
| 5 | F, J (D, H) | Histone H2B 1.1 | polymer | 95 | 10607.2 | 2 | UniProt (P02281) Pfam (PF00125) UniProt (by SIFTS) (P06899) | Xenopus laevis (African clawed frog) | H2B1.1 |
| 6 | K (K) | [histone H4]-N-methyl-L-lysine20 N-methyltransferase KMT5B | polymer | 279 | 32214.8 | 1 | UniProt (B7WNX0) Pfam (PF00856) UniProt (by SIFTS) (Q4FZB7) | Homo sapiens (human) | [histone H4]-lysine20 N-methyltransferase KMT5B |
| 7 | L (K) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 8 | M (K) | S-ADENOSYLMETHIONINE | non-polymer | 398.4 | 1 | Chemie (SAM) PubChem (5136) PubChem (34755) PubChem (58633578) PubChem (60038769) PubChem (58766358) PubChem (73897310) PubChem (9865603) PubChem (87224684) PubChem (12312798) PubChem (131697735) PubChem (145712080) PubChem (132988922) PubChem (134692588) PubChem (135030730) PubChem (140459785) PubChem (163046094) |
Sequence modifications
A, E: 33 - 135 (UniProt: P84233)
B, F: 1 - 102 (UniProt: P62799)
D, H: 31 - 125 (UniProt: P02281)
| PDB | External Database | Details |
|---|---|---|
| Glu 34 | Gly 35 | engineered mutation |
| Ala 102 | Gly 103 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Ecx 20 | Lys 21 | modified residue |
| PDB | External Database | Details |
|---|---|---|
| Thr 32 | Ser 33 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 11 |
| Total formula weight | 214343.8 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 463.8 | |
| All* | Total formula weight | 214807.6 |






