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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

7YLA

Cryo-EM structure of 50S-HflX complex

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
16GTPase HflXpolymer42648363.01UniProt (P25519)
Pfam (PF13167)
Pfam (PF16360)
Pfam (PF01926)
Pfam (PF19275)
In PDB		Escherichia coliGTP-binding protein HflX
2IEscherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genomepolymer2904941612.41GenBank (937521852)Escherichia coli23S rRNA
3J5S rRNApolymer11838177.81GenBank (1727529157)Escherichia coli
4K50S ribosomal protein L2polymer27129663.21UniProt (A0A1X3LPI5)
In PDB		Escherichia coli
5L50S ribosomal protein L3polymer20922277.51UniProt (C3SQU2)
Pfam (PF00297)
In PDB		Escherichia coli
6M50S ribosomal protein L4polymer20122121.61UniProt (P60723)
Pfam (PF00573)
In PDB		Escherichia coliLarge ribosomal subunit protein uL4
7N50S ribosomal protein L5polymer17720073.21UniProt (P62399)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Escherichia coliLarge ribosomal subunit protein uL5
8O50S ribosomal protein L6polymer17618801.61UniProt (C3SR17)
Pfam (PF00347)
In PDB		Escherichia coli
9P50S ribosomal protein L9polymer14915789.01UniProt (P0A7R1)
Pfam (PF01281)
Pfam (PF03948)
In PDB		Escherichia coliLarge ribosomal subunit protein bL9
10Q50S ribosomal protein L11polymer13414020.31UniProt (P0A7J7)
Pfam (PF03946)
Pfam (PF00298)
In PDB		Escherichia coliLarge ribosomal subunit protein uL11
11R50S ribosomal protein L13polymer14216050.61UniProt (P0AA10)
Pfam (PF00572)
In PDB		Escherichia coliLarge ribosomal subunit protein uL13
12S50S ribosomal protein L14polymer12213451.91UniProt (C3SQZ2)
Pfam (PF00238)
In PDB		Escherichia coli
13T50S ribosomal protein L15polymer14415008.51UniProt (P02413)
Pfam (PF00828)
In PDB		Escherichia coli K-12
14U50S ribosomal protein L16polymer13615312.31UniProt (P0ADY7)
Pfam (PF00252)
In PDB		Escherichia coliLarge ribosomal subunit protein uL16
15V50S ribosomal protein L17polymer12013721.91UniProt (A0A1X3LC97)
In PDB		Escherichia coli
16W50S ribosomal protein L18polymer11612663.51UniProt (P0C018)
Pfam (PF00861)
In PDB		Escherichia coliLarge ribosomal subunit protein uL18
17X50S ribosomal protein L19polymer11413028.11UniProt (P0A7K6)
Pfam (PF01245)
In PDB		Escherichia coliLarge ribosomal subunit protein bL19
18Y50S ribosomal protein L20polymer11713396.81UniProt (P0A7L3)
Pfam (PF00453)
In PDB		Escherichia coliLarge ribosomal subunit protein bL20
19Z50S ribosomal protein L21polymer10311586.41UniProt (P0AG48)
Pfam (PF00829)
In PDB		Escherichia coliLarge ribosomal subunit protein bL21
20a50S ribosomal protein L22polymer11012253.41UniProt (P61175)
Pfam (PF00237)
In PDB		Escherichia coliLarge ribosomal subunit protein uL22
21b50S ribosomal protein L23polymer9310546.51UniProt (P0ADZ0)
Pfam (PF00276)
In PDB		Escherichia coliLarge ribosomal subunit protein uL23
22c50S ribosomal protein L24polymer10211078.91UniProt (F4TL32)
In PDB		Escherichia coli
23d50S ribosomal protein L25polymer9410713.51UniProt (P68919)
Pfam (PF01386)
In PDB		Escherichia coliLarge ribosomal subunit protein bL25
24e50S ribosomal protein L27polymer758174.41UniProt (P0A7L8)
Pfam (PF01016)
In PDB		Escherichia coliLarge ribosomal subunit protein bL27
25f50S ribosomal protein L28polymer778896.41UniProt (P0A7M2)
Pfam (PF00830)
In PDB		Escherichia coliLarge ribosomal subunit protein bL28
26g50S ribosomal protein L29polymer627155.31UniProt (P0A7M6)
Pfam (PF00831)
In PDB		Escherichia coliLarge ribosomal subunit protein uL29
27h50S ribosomal protein L30polymer586423.61UniProt (P0AG51)
Pfam (PF00327)
In PDB		Escherichia coliLarge ribosomal subunit protein uL30
28i50S ribosomal protein L32polymer566332.21UniProt (D7XI28)
In PDB		Escherichia coli
29j50S ribosomal protein L33polymer505814.81UniProt (P0A7N9)
Pfam (PF00471)
In PDB		Escherichia coliLarge ribosomal subunit protein bL33
30k50S ribosomal protein L34polymer465397.51UniProt (P0A7P5)
Pfam (PF00468)
In PDB		Escherichia coliLarge ribosomal subunit protein bL34
31l50S ribosomal protein L35polymer647181.81UniProt (P0A7Q1)
Pfam (PF01632)
In PDB		Escherichia coliLarge ribosomal subunit protein bL35,Ribosomal protein A
32m50S ribosomal protein L36polymer384377.41UniProt (P0A7Q6)
Pfam (PF00444)
In PDB		Escherichia coliLarge ribosomal subunit protein bL36-A,Ribosomal protein B
336PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERnon-polymer522.21Chemie (GNP)
346, K, LMAGNESIUM IONnon-polymer24.33Chemie (MG)
35KSODIUM IONnon-polymer23.01Chemie (NA)
36mZINC IONnon-polymer65.41Chemie (ZN)
Sequence modifications
6: 1 - 426 (UniProt: P25519)
PDBExternal DatabaseDetails
Ala 19Thr 19conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains32
Total formula weight1399465.1
Non-Polymers*Number of molecules6
Total formula weight683.5
All*Total formula weight1400148.6
*Water molecules are not included.

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PDB entries from 2024-07-24

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