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7YLA

Cryo-EM structure of 50S-HflX complex

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(6)
GTPase HflXpolymer42648363.01UniProt (P25519)
Pfam (PF13167)
Pfam (PF16360)
Pfam (PF01926)
Pfam (PF19275)
Escherichia coliGTP-binding protein HflX
2B
(I)
Escherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genomepolymer2904941612.41GenBank (937521852)Escherichia coli23S rRNA
3C
(J)
5S rRNApolymer11838177.81GenBank (1727529157)Escherichia coli
4D
(K)
50S ribosomal protein L2polymer27129663.21UniProt (A0A1X3LPI5)Escherichia coli
5E
(L)
50S ribosomal protein L3polymer20922277.51UniProt (C3SQU2)
Pfam (PF00297)
Escherichia coli
6F
(M)
50S ribosomal protein L4polymer20122121.61UniProt (P60723)
Pfam (PF00573)
Escherichia coliLarge ribosomal subunit protein uL4
7G
(N)
50S ribosomal protein L5polymer17720073.21UniProt (P62399)
Pfam (PF00281)
Pfam (PF00673)
Escherichia coliLarge ribosomal subunit protein uL5
8H
(O)
50S ribosomal protein L6polymer17618801.61UniProt (C3SR17)
Pfam (PF00347)
Escherichia coli
9I
(P)
50S ribosomal protein L9polymer14915789.01UniProt (P0A7R1)
Pfam (PF01281)
Pfam (PF03948)
Escherichia coliLarge ribosomal subunit protein bL9
10J
(Q)
50S ribosomal protein L11polymer13414020.31UniProt (P0A7J7)
Pfam (PF03946)
Pfam (PF00298)
Escherichia coliLarge ribosomal subunit protein uL11
11K
(R)
50S ribosomal protein L13polymer14216050.61UniProt (P0AA10)
Pfam (PF00572)
Escherichia coliLarge ribosomal subunit protein uL13
12L
(S)
50S ribosomal protein L14polymer12213451.91UniProt (C3SQZ2)
Pfam (PF00238)
Escherichia coli
13M
(T)
50S ribosomal protein L15polymer14415008.51UniProt (P02413)
Pfam (PF00828)
Escherichia coli K-12
14N
(U)
50S ribosomal protein L16polymer13615312.31UniProt (P0ADY7)
Pfam (PF00252)
Escherichia coliLarge ribosomal subunit protein uL16
15O
(V)
50S ribosomal protein L17polymer12013721.91UniProt (A0A1X3LC97)Escherichia coli
16P
(W)
50S ribosomal protein L18polymer11612663.51UniProt (P0C018)
Pfam (PF00861)
Escherichia coliLarge ribosomal subunit protein uL18
17Q
(X)
50S ribosomal protein L19polymer11413028.11UniProt (P0A7K6)
Pfam (PF01245)
Escherichia coliLarge ribosomal subunit protein bL19
18R
(Y)
50S ribosomal protein L20polymer11713396.81UniProt (P0A7L3)
Pfam (PF00453)
Escherichia coliLarge ribosomal subunit protein bL20
19S
(Z)
50S ribosomal protein L21polymer10311586.41UniProt (P0AG48)
Pfam (PF00829)
Escherichia coliLarge ribosomal subunit protein bL21
20T
(a)
50S ribosomal protein L22polymer11012253.41UniProt (P61175)
Pfam (PF00237)
Escherichia coliLarge ribosomal subunit protein uL22
21U
(b)
50S ribosomal protein L23polymer9310546.51UniProt (P0ADZ0)
Pfam (PF00276)
Escherichia coliLarge ribosomal subunit protein uL23
22V
(c)
50S ribosomal protein L24polymer10211078.91UniProt (F4TL32)Escherichia coli
23W
(d)
50S ribosomal protein L25polymer9410713.51UniProt (P68919)
Pfam (PF01386)
Escherichia coliLarge ribosomal subunit protein bL25
24X
(e)
50S ribosomal protein L27polymer758174.41UniProt (P0A7L8)
Pfam (PF01016)
Escherichia coliLarge ribosomal subunit protein bL27
25Y
(f)
50S ribosomal protein L28polymer778896.41UniProt (P0A7M2)
Pfam (PF00830)
Escherichia coliLarge ribosomal subunit protein bL28
26Z
(g)
50S ribosomal protein L29polymer627155.31UniProt (P0A7M6)
Pfam (PF00831)
Escherichia coliLarge ribosomal subunit protein uL29
27AA
(h)
50S ribosomal protein L30polymer586423.61UniProt (P0AG51)
Pfam (PF00327)
Escherichia coliLarge ribosomal subunit protein uL30
28BA
(i)
50S ribosomal protein L32polymer566332.21UniProt (D7XI28)Escherichia coli
29CA
(j)
50S ribosomal protein L33polymer505814.81UniProt (P0A7N9)
Pfam (PF00471)
Escherichia coliLarge ribosomal subunit protein bL33
30DA
(k)
50S ribosomal protein L34polymer465397.51UniProt (P0A7P5)
Pfam (PF00468)
Escherichia coliLarge ribosomal subunit protein bL34
31EA
(l)
50S ribosomal protein L35polymer647181.81UniProt (P0A7Q1)
Pfam (PF01632)
Escherichia coliLarge ribosomal subunit protein bL35,Ribosomal protein A
32FA
(m)
50S ribosomal protein L36polymer384377.41UniProt (P0A7Q6)
Pfam (PF00444)
Escherichia coliLarge ribosomal subunit protein bL36-A,Ribosomal protein B
33GA
(6)
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTERnon-polymer522.21Chemie (GNP)
34HA, IA, KA
(6, K, L)
MAGNESIUM IONnon-polymer24.33Chemie (MG)
35JA
(K)
SODIUM IONnon-polymer23.01Chemie (NA)
36LA
(m)
ZINC IONnon-polymer65.41Chemie (ZN)
Sequence modifications
6: 1 - 426 (UniProt: P25519)
PDBExternal DatabaseDetails
Ala 19Thr 19conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains32
Total formula weight1399465.1
Non-Polymers*Number of molecules6
Total formula weight683.5
All*Total formula weight1400148.6
*Water molecules are not included.

237992

PDB entries from 2025-06-25

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