7YJN
Cryo-EM structure of the monomeric atSPT-ORM1 (ORM1-N17A) complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Long chain base biosynthesis protein 1 | polymer | 420 | 46276.1 | 1 | UniProt (Q94IB8) Pfam (PF00155) In PDB | Arabidopsis thaliana (thale cress) | |
2 | B | Long chain base biosynthesis protein 2a | polymer | 489 | 54359.5 | 1 | UniProt (Q9LSZ9) Pfam (PF00155) In PDB | Arabidopsis thaliana (thale cress) | AtLCB2a,Long chain base biosynthesis protein 2,AtLCB2 |
3 | D | ORMDL family protein | polymer | 157 | 18177.2 | 1 | UniProt (Q9C5I0) Pfam (PF04061) In PDB | Arabidopsis thaliana (thale cress) | atORM1 |
4 | E | Long chain base biosynthesis protein 1 | polymer | 62 | 6949.4 | 1 | UniProt (Q94IB8) In PDB | Arabidopsis thaliana (thale cress) | AtLCB1,Protein EMBRYO DEFECTIVE 2779,Protein FUMONISIN B1 RESISTANT 11 |
5 | C | Transmembrane protein, putative (DUF3317) | polymer | 77 | 9442.7 | 1 | UniProt (A8MSB8) Pfam (PF11779) In PDB | Arabidopsis thaliana (thale cress) | |
6 | B | PYRIDOXAL-5'-PHOSPHATE | non-polymer | 247.1 | 1 | Chemie (PLP) |
Sequence modifications
D: 1 - 157 (UniProt: Q9C5I0)
C: 1 - 56 (UniProt: A8MSB8)
PDB | External Database | Details |
---|---|---|
Ala 17 | Asn 17 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Met -20 | - | initiating methionine |
Ala -19 | - | expression tag |
Asp -18 | - | expression tag |
Tyr -17 | - | expression tag |
Lys -16 | - | expression tag |
Asp -15 | - | expression tag |
Asp -14 | - | expression tag |
Asp -13 | - | expression tag |
Asp -12 | - | expression tag |
Lys -11 | - | expression tag |
Ser -10 | - | expression tag |
Gly -9 | - | expression tag |
Pro -8 | - | expression tag |
Asp -7 | - | expression tag |
Glu -6 | - | expression tag |
Val -5 | - | expression tag |
Asp -4 | - | expression tag |
Ala -3 | - | expression tag |
Ser -2 | - | expression tag |
Gly -1 | - | expression tag |
Arg 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 5 |
Total formula weight | 135204.9 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 247.1 | |
All* | Total formula weight | 135452.0 |