7YI0
Cryo-EM structure of Rpd3S complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Transcriptional regulatory protein SIN3 | polymer | 1536 | 175047.3 | 1 | UniProt (P22579) Pfam (PF02671) Pfam (PF08295) Pfam (PF16879) In PDB | Saccharomyces cerevisiae S288C (baker's yeast) | |
| 2 | B | Histone deacetylase RPD3 | polymer | 433 | 48962.0 | 1 | UniProt (P32561) Pfam (PF00850) In PDB | Saccharomyces cerevisiae S288C (baker's yeast) | Transcriptional regulatory protein RPD3 |
| 3 | C, E | Chromatin modification-related protein EAF3 | polymer | 401 | 45266.4 | 2 | UniProt (Q12432) Pfam (PF11717) Pfam (PF22732) Pfam (PF05712) In PDB | Saccharomyces cerevisiae S288C (baker's yeast) | ESA1-associated factor 3 |
| 4 | D | Transcriptional regulatory protein RCO1 | polymer | 684 | 78951.3 | 1 | UniProt (Q04779) Pfam (PF00628) In PDB | Saccharomyces cerevisiae S288C (baker's yeast) | |
| 5 | F | Transcriptional regulatory protein RCO1 | polymer | 684 | 78875.2 | 1 | UniProt (Q04779) Pfam (PF00628) In PDB | Saccharomyces cerevisiae S288C (baker's yeast) | |
| 6 | B, D, F | ZINC ION | non-polymer | 65.4 | 7 | Chemie (ZN) |
Sequence modifications
F: 1 - 684 (UniProt: Q04779)
| PDB | External Database | Details |
|---|---|---|
| Ala 567 | Phe 567 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 472368.6 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 457.9 | |
| All* | Total formula weight | 472826.4 |
