7YEI
TR-SFX MmCPDII-DNA complex: 10 ns time-point collected in SACLA. Includes 10 ns, dark, and extrapolated structure factors
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Deoxyribodipyrimidine photolyase | polymer | 482 | 55123.5 | 2 | UniProt (A0A0F8I5V2) Pfam (PF00875) UniProt (by SIFTS) (Q8PYK9) | Methanosarcina mazei | |
| 2 | C, E (C, E) | CPD photolesion containing DNA after repair | polymer | 15 | 4570.0 | 2 | synthetic construct | ||
| 3 | D, F (D, F) | complementary oligonucleotide to the CPD containing DNA | polymer | 14 | 4305.8 | 2 | synthetic construct | ||
| 4 | G, I (A, B) | FLAVIN-ADENINE DINUCLEOTIDE | non-polymer | 785.5 | 2 | Chemie (FAD) | |||
| 5 | H (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 6 | J, K, L, M, N... (A, B, C, D, E...) | water | water | 18.0 | 221 | Chemie (HOH) |
Sequence modifications
A, B: 3 - 464 (UniProt: A0A0F8I5V2)
| PDB | External Database | Details |
|---|---|---|
| Met -17 | - | initiating methionine |
| Gly -16 | - | expression tag |
| Ser -15 | - | expression tag |
| Ser -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| His -9 | - | expression tag |
| His -8 | - | expression tag |
| Ser -7 | - | expression tag |
| Ser -6 | - | expression tag |
| Gly -5 | - | expression tag |
| Leu -4 | - | expression tag |
| Val -3 | - | expression tag |
| Pro -2 | - | expression tag |
| Arg -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Ser 1 | - | expression tag |
| His 2 | - | expression tag |
| Thr 377 | Met 375 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 127998.5 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 1667.2 | |
| All* | Total formula weight | 129665.7 |






