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7YEI

TR-SFX MmCPDII-DNA complex: 10 ns time-point collected in SACLA. Includes 10 ns, dark, and extrapolated structure factors

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Deoxyribodipyrimidine photolyasepolymer48255123.52UniProt (A0A0F8I5V2)
Pfam (PF00875)
UniProt (by SIFTS) (Q8PYK9)
Methanosarcina mazei
2C, E
(C, E)
CPD photolesion containing DNA after repairpolymer154570.02synthetic construct
3D, F
(D, F)
complementary oligonucleotide to the CPD containing DNApolymer144305.82synthetic construct
4G, I
(A, B)
FLAVIN-ADENINE DINUCLEOTIDEnon-polymer785.52Chemie (FAD)
5H
(A)
SULFATE IONnon-polymer96.11Chemie (SO4)
6J, K, L, M, N...
(A, B, C, D, E...)
waterwater18.0221Chemie (HOH)
Sequence modifications
A, B: 3 - 464 (UniProt: A0A0F8I5V2)
PDBExternal DatabaseDetails
Met -17-initiating methionine
Gly -16-expression tag
Ser -15-expression tag
Ser -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
His -9-expression tag
His -8-expression tag
Ser -7-expression tag
Ser -6-expression tag
Gly -5-expression tag
Leu -4-expression tag
Val -3-expression tag
Pro -2-expression tag
Arg -1-expression tag
Gly 0-expression tag
Ser 1-expression tag
His 2-expression tag
Thr 377Met 375engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight127998.5
Non-Polymers*Number of molecules3
Total formula weight1667.2
All*Total formula weight129665.7
*Water molecules are not included.

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PDB entries from 2025-12-03

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