7YEB

TR-SFX MmCPDII-DNA complex: 3.35 ns snapshot. Includes 3.35 ns, dark, and extrapolated structure factors

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B	Deoxyribodipyrimidine photolyase	polymer	482	55123.5	2	UniProt (A0A0F8I5V2) Pfam (PF00875) UniProt (by SIFTS) (Q8PYK9) In PDB	Methanosarcina mazei
2	C	CPD photolesion containing DNA	polymer	14	4570.0	1		synthetic construct
3	D, F	complementary oligonucleotide to the CPD containing DNA	polymer	14	4305.8	2		synthetic construct
4	E	CPD photolesion containing DNA after repair	polymer	15	4570.0	1		synthetic construct
5	A	SULFATE ION	non-polymer		96.1	1	Chemie (SO4)
6	A, B	FLAVIN-ADENINE DINUCLEOTIDE	non-polymer		785.5	2	Chemie (FAD)
7		water	water		18.0	372	Chemie (HOH)

Sequence modifications

A, B: 3 - 464 (UniProt: A0A0F8I5V2)

PDB	External Database	Details
Met -17	-	initiating methionine
Gly -16	-	expression tag
Ser -15	-	expression tag
Ser -14	-	expression tag
His -13	-	expression tag
His -12	-	expression tag
His -11	-	expression tag
His -10	-	expression tag
His -9	-	expression tag
His -8	-	expression tag
Ser -7	-	expression tag
Ser -6	-	expression tag
Gly -5	-	expression tag
Leu -4	-	expression tag
Val -3	-	expression tag
Pro -2	-	expression tag
Arg -1	-	expression tag
Gly 0	-	expression tag
Ser 1	-	expression tag
His 2	-	expression tag
Thr 377	Met 375	engineered mutation

Contents of the asymmetric unit

Polymers	Number of chains	6
	Total formula weight	127998.5
Non-Polymers*	Number of molecules	3
	Total formula weight	1667.2
All*	Total formula weight	129665.7

*Water molecules are not included.