7YCK
Crystal structure of SARS-CoV-2 Spike RBD in complex with FP-12A Fab
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Spike protein S1 | polymer | 204 | 23047.8 | 2 | UniProt (P0DTC2) Pfam (PF09408) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2) | |
2 | C, E | FP-12A Fab heavy chain | polymer | 224 | 23925.7 | 2 | Homo sapiens | ||
3 | D, F | FP-12A Fab light chain | polymer | 216 | 23124.3 | 2 | Homo sapiens | ||
4 | G | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G32152BH) | |||
5 | H | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G21290RB) | |||
6 | water | water | 18.0 | 127 | Chemie (HOH) |
Sequence modifications
A, B: 333 - 530 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
His 531 | - | expression tag |
His 532 | - | expression tag |
His 533 | - | expression tag |
His 534 | - | expression tag |
His 535 | - | expression tag |
His 536 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 140195.7 | |
Branched | Number of molecules | 2 |
Total formula weight | 1303.2 | |
All* | Total formula weight | 141499.0 |