7XVM

Crystal Structure of Nucleosome-H5 Linker Histone Assembly (sticky-169a DNA fragment)

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, E, K, O (A, E, K, O)	Histone H3.1	polymer	138	15581.3	4	UniProt (P68431) Pfam (PF00125)	Homo sapiens (human)	Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l
2	B, F, L, P (B, F, L, P)	Histone H4	polymer	105	11538.6	4	UniProt (P62805) Pfam (PF15511)	Homo sapiens (human)
3	C, G, M, Q (C, G, M, Q)	Histone H2A type 1-B/E	polymer	132	14309.7	4	UniProt (P04908) Pfam (PF00125) Pfam (PF16211)	Homo sapiens (human)	Histone H2A.2,Histone H2A/a,Histone H2A/m
4	D, H, N, R (D, H, N, R)	Histone H2B type 1-J	polymer	128	14079.4	4	UniProt (P06899) Pfam (PF00125)	Homo sapiens (human)	Histone H2B.1,Histone H2B.r,H2B/r
5	I, S (I, S)	DNA (169-MER)	polymer	169	52173.3	2		synthetic construct
6	J, T (J, T)	DNA (169-MER)	polymer	169	52164.3	2		synthetic construct
7	U, V (U, V)	Histone H5	polymer	190	20758.9	2	UniProt (P02259) Pfam (PF00538)	Gallus gallus (chicken)
8	AA, BA, CA, DA, EA... (I, J, S, T, C)	CALCIUM ION	non-polymer		40.1	18	Chemie (CA)
9	LA, X, Y (M, C, H)	CHLORIDE ION	non-polymer		35.5	3	Chemie (CL)
10	HA, SA (I, T)	POTASSIUM ION	non-polymer		39.1	2	Chemie (K)
11	AB, BB, TA, UA, VA... (I, Q, A, B, C...)	water	water		18.0	11	Chemie (HOH)

Sequence modifications

A, E, K, O: 0 - 135 (UniProt: P68431)

PDB	External Database	Details
Gly -2	-	expression tag
Ser -1	-	expression tag

B, F, L, P: 0 - 102 (UniProt: P62805)

PDB	External Database	Details
Gly -2	-	expression tag
Ser -1	-	expression tag

C, G, M, Q: 0 - 129 (UniProt: P04908)

PDB	External Database	Details
Gly -2	-	expression tag
Ser -1	-	expression tag

D, H, N, R: 0 - 125 (UniProt: P06899)

PDB	External Database	Details
Gly -2	-	expression tag
Ser -1	-	expression tag

U, V: 2 - 190 (UniProt: P02259)

PDB	External Database	Details
Ser 1	-	expression tag

Sequence viewer

Contents of the asymmetric unit

*Water molecules are not included.