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7XUR

The cryo-EM structure of human mini-SNAPc in complex with hU6-1 PSE

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AsnRNA-activating protein complex subunit 4polymer52260780.31UniProt (Q5SXM2)
Pfam (PF13921)
In PDB
Homo sapiens (human)SNAPc subunit 4,Proximal sequence element-binding transcription factor subunit alpha,PSE-binding factor subunit alpha,PTF subunit alpha,snRNA-activating protein complex 190 kDa subunit,SNAPc 190 kDa subunit
2BsnRNA-activating protein complex subunit 3polymer41146812.61UniProt (Q92966)
Pfam (PF12251)
In PDB
Homo sapiens (human)SNAPc subunit 3,Proximal sequence element-binding transcription factor subunit beta,PSE-binding factor subunit beta,PTF subunit beta,Small nuclear RNA-activating complex polypeptide 3,snRNA-activating protein complex 50 kDa subunit,SNAPc 50 kDa subunit
3CsnRNA-activating protein complex subunit 1polymer28233559.51UniProt (Q16533)
Pfam (PF09808)
In PDB
Homo sapiens (human)SNAPc subunit 1,Proximal sequence element-binding transcription factor subunit gamma,PSE-binding factor subunit gamma,PTF subunit gamma,Small nuclear RNA-activating complex polypeptide 1,snRNA-activating protein complex 43 kDa subunit,SNAPc 43 kDa subunit
4XDNA (35-MER)polymer3510726.91synthetic construct
5YDNA (35-MER)polymer3510803.01synthetic construct
6BZINC IONnon-polymer65.42Chemie (ZN)
Sequence modifications
A: 1 - 505 (UniProt: Q5SXM2)
PDBExternal DatabaseDetails
Asp -16-expression tag
Tyr -15-expression tag
Lys -14-expression tag
Asp -13-expression tag
Asp -12-expression tag
Asp -11-expression tag
Asp -10-expression tag
Lys -9-expression tag
Ser -8-expression tag
Leu -7-expression tag
Glu -6-expression tag
Val -5-expression tag
Leu -4-expression tag
Phe -3-expression tag
Gln -2-expression tag
Gly -1-expression tag
Pro 0-expression tag
C: 1 - 268 (UniProt: Q16533)
PDBExternal DatabaseDetails
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
His -9-expression tag
His -8-expression tag
Ser -7-expression tag
Glu -6-expression tag
Asn -5-expression tag
Leu -4-expression tag
Tyr -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Gly 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight162682.3
Non-Polymers*Number of molecules2
Total formula weight130.8
All*Total formula weight162813.1
*Water molecules are not included.

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PDB entries from 2024-08-14

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