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7XUC

Structure of G9a in complex with compound 11a

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Histone-lysine N-methyltransferase EHMT2polymer28332604.92UniProt (Q96KQ7)
Pfam (PF05033)
Pfam (PF00856)
Homo sapiens (human)Euchromatic histone-lysine N-methyltransferase 2,HLA-B-associated transcript 8,Histone H3-K9 methyltransferase 3,H3-K9-HMTase 3,Lysine N-methyltransferase 1C,Protein G9a
2C, D, E, F, K...
(A, B)
ZINC IONnon-polymer65.48Chemie (ZN)
3G, O
(A, B)
SINEFUNGINnon-polymer381.42Chemie (SFG)
PubChem (456189)
PubChem (4065234)
PubChem (6917665)
PubChem (12771337)
PubChem (25246236)
PubChem (176612030)
PubChem (177116271)
PubChem (46875078)
PubChem (46936257)
PubChem (65482)
PubChem (70789212)
PubChem (93287274)
PubChem (12771338)
PubChem (70602121)
PubChem (92403972)
PubChem (93287270)
PubChem (93287272)
PubChem (93475589)
PubChem (131971033)
PubChem (131972810)
PubChem (138626357)
PubChem (156562738)
PubChem (162866891)
PubChem (163339130)
PubChem (168280605)
4H, P
(A, B)
3,6,6-trimethyl-4-oxidanylidene-~{N}-[(2~{S})-1-oxidanylidene-1-phenylazanyl-hexan-2-yl]-5,7-dihydro-1~{H}-indole-2-carboxamidenon-polymer409.52Chemie (I6S)
5I, Q, R
(A, B)
1,2-ETHANEDIOLnon-polymer62.13Chemie (EDO)
6J
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
PubChem (312)
7S, T
(A, B)
waterwater18.0678Chemie (HOH)
Sequence modifications
A, B: 913 - 1193 (UniProt: Q96KQ7)
PDBExternal DatabaseDetails
Gly 911-expression tag
Ser 912-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight65209.8
Non-Polymers*Number of molecules16
Total formula weight2326.7
All*Total formula weight67536.6
*Water molecules are not included.

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PDB entries from 2026-04-08

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