7XSB
Crystal structure of SARS-CoV-2 spike receptor binding domain bound with P5S-3B11 Fab
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | E, A, B, C | Spike protein S1 | polymer | 243 | 27234.7 | 4 | UniProt (P0DTC2) Pfam (PF09408) In PDB | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2) | |
2 | H, D, G, J | P5S-3B11 Heavy chain | polymer | 217 | 23307.2 | 4 | Homo sapiens | ||
3 | L, F, I, K | P5S-3B11 Light chain | polymer | 216 | 23186.5 | 4 | Homo sapiens |
Sequence modifications
E, A, B, C: 333 - 528 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
Met 292 | - | initiating methionine |
Leu 293 | - | expression tag |
Leu 294 | - | expression tag |
Val 295 | - | expression tag |
Asn 296 | - | expression tag |
Gln 297 | - | expression tag |
Ser 298 | - | expression tag |
His 299 | - | expression tag |
Gln 300 | - | expression tag |
Gly 301 | - | expression tag |
Phe 302 | - | expression tag |
Asn 303 | - | expression tag |
Lys 304 | - | expression tag |
Glu 305 | - | expression tag |
His 306 | - | expression tag |
Thr 307 | - | expression tag |
Ser 308 | - | expression tag |
Lys 309 | - | expression tag |
Met 310 | - | expression tag |
Val 311 | - | expression tag |
Ser 312 | - | expression tag |
Ala 313 | - | expression tag |
Ile 314 | - | expression tag |
Val 315 | - | expression tag |
Leu 316 | - | expression tag |
Tyr 317 | - | expression tag |
Val 318 | - | expression tag |
Leu 319 | - | expression tag |
Leu 320 | - | expression tag |
Ala 321 | - | expression tag |
Ala 322 | - | expression tag |
Ala 323 | - | expression tag |
Ala 324 | - | expression tag |
His 325 | - | expression tag |
Ser 326 | - | expression tag |
Ala 327 | - | expression tag |
Phe 328 | - | expression tag |
Ala 329 | - | expression tag |
Ala 330 | - | expression tag |
Asp 331 | - | expression tag |
Pro 332 | - | expression tag |
Asn 417 | Lys 417 | variant |
Lys 484 | Glu 484 | variant |
Tyr 501 | Asn 501 | variant |
His 529 | - | expression tag |
His 530 | - | expression tag |
His 531 | - | expression tag |
His 532 | - | expression tag |
His 533 | - | expression tag |
His 534 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 294913.6 | |
All* | Total formula weight | 294913.6 |