7XRL
Diol dehydratase complexed with AdoMeCbl and 1,2-propanediol
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, D (A, D) | Diol dehydrase alpha subunit | polymer | 554 | 60408.1 | 2 | UniProt (Q59470) Pfam (PF02286) | Klebsiella oxytoca | Propanediol dehydratase,Propanediol dehydratase large subunit |
2 | B, E (B, E) | Diol dehydrase beta subunit | polymer | 200 | 21721.9 | 2 | UniProt (Q59471) Pfam (PF02288) | Klebsiella oxytoca | |
3 | C, F (C, F) | Diol dehydrase gamma subunit | polymer | 137 | 15611.7 | 2 | UniProt (Q59472) Pfam (PF02287) | Klebsiella oxytoca | Propanediol dehydratase,Propanediol dehydratase small subunit |
4 | G, M (A, D) | S-1,2-PROPANEDIOL | non-polymer | 76.1 | 2 | Chemie (PGO) | |||
5 | H, N (A, D) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
6 | I, O (A, D) | POTASSIUM ION | non-polymer | 39.1 | 2 | Chemie (K) | |||
7 | J, P (A, D) | AMMONIUM ION | non-polymer | 18.0 | 2 | Chemie (NH4) | |||
8 | K, Q (A, D) | (2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-ethyl-oxolane-3,4-diol | non-polymer | 265.3 | 2 | Chemie (FWK) | |||
9 | L, R (B, E) | COBALAMIN | non-polymer | 1330.4 | 2 | Chemie (B12) | |||
10 | S, T, U, V, W... (A, B, C, D, E...) | water | water | 18.0 | 1569 | Chemie (HOH) |
Sequence modifications
B, E: 46 - 224 (UniProt: Q59471)
C, F: 38 - 173 (UniProt: Q59472)
PDB | External Database | Details |
---|---|---|
Met 25 | - | expression tag |
Ser 26 | - | expression tag |
Ser 27 | - | expression tag |
His 28 | - | expression tag |
His 29 | - | expression tag |
His 30 | - | expression tag |
His 31 | - | expression tag |
His 32 | - | expression tag |
His 33 | - | expression tag |
Ser 34 | - | expression tag |
Ala 35 | - | expression tag |
Ala 36 | - | expression tag |
Leu 37 | - | expression tag |
Glu 38 | - | expression tag |
Val 39 | - | expression tag |
Leu 40 | - | expression tag |
Phe 41 | - | expression tag |
Gln 42 | - | expression tag |
Gly 43 | - | expression tag |
Pro 44 | - | expression tag |
Gly 45 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 37 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 195483.5 | |
Non-Polymers* | Number of molecules | 12 |
Total formula weight | 3537.9 | |
All* | Total formula weight | 199021.4 |