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7XRK

Diol dehydratase complexed with AdoMeCbl

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(A, D)
Diol dehydrase alpha subunitpolymer55460410.12UniProt (Q59470)
Pfam (PF02286)
Klebsiella oxytocaPropanediol dehydratase,Propanediol dehydratase large subunit
2B, E
(B, E)
Diol dehydrase beta subunitpolymer20021721.92UniProt (Q59471)
Pfam (PF02288)
Klebsiella oxytoca
3C, F
(C, F)
Diol dehydrase gamma subunitpolymer13715611.72UniProt (Q59472)
Pfam (PF02287)
Klebsiella oxytocaPropanediol dehydratase,Propanediol dehydratase small subunit
4G, K
(A, D)
CALCIUM IONnon-polymer40.12Chemie (CA)
5H, L
(A, D)
POTASSIUM IONnon-polymer39.12Chemie (K)
6I, M
(A, D)
(2~{R},3~{R},4~{S},5~{R})-2-(6-aminopurin-9-yl)-5-ethyl-oxolane-3,4-diolnon-polymer265.32Chemie (FWK)
7J, N
(B, E)
COBALAMINnon-polymer1330.42Chemie (B12)
8O, P, Q, R, S...
(A, B, C, D, E...)
waterwater18.0408Chemie (HOH)
Sequence modifications
A, D: 1 - 554 (UniProt: Q59470)
PDBExternal DatabaseDetails
Asp 553Ile 553conflict
B, E: 46 - 224 (UniProt: Q59471)
PDBExternal DatabaseDetails
Met 25-expression tag
Ser 26-expression tag
Ser 27-expression tag
His 28-expression tag
His 29-expression tag
His 30-expression tag
His 31-expression tag
His 32-expression tag
His 33-expression tag
Ser 34-expression tag
Ala 35-expression tag
Ala 36-expression tag
Leu 37-expression tag
Glu 38-expression tag
Val 39-expression tag
Leu 40-expression tag
Phe 41-expression tag
Gln 42-expression tag
Gly 43-expression tag
Pro 44-expression tag
Gly 45-expression tag
C, F: 38 - 173 (UniProt: Q59472)
PDBExternal DatabaseDetails
Met 37-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight195487.4
Non-Polymers*Number of molecules8
Total formula weight3349.6
All*Total formula weight198837.0
*Water molecules are not included.

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PDB entries from 2025-07-02

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